RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 HSPB7Q9UBY9 170 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
CDH1-213ENST00000612417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.3□□□□□ -0.44
CDH1-213ENST00000612417 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 GRPP07492 148 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 CECR9P0C854 216 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 FAM90A2PQ658T7 463 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
CDH1-213ENST00000612417 S100PBPQ96BU1 408 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
CDH1-213ENST00000612417 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
CDH1-213ENST00000612417 A0A0G2JNJ9 132 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 C12orf77C9JDV5 145 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 MLNRO43193 412 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 RNF224P0DH78 156 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 TUBG1P23258 451 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 MPV17P39210 176 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 GLIPR1P48060 266 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 PCP4P48539 62 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 CEBPGP53567 150 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
CDH1-213ENST00000612417 ELOBQ15370 118 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
CDH1-213ENST00000612417 C11orf53Q8IXP5 236 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 OR1L1Q8NH94 360 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 ZCCHC14Q8WYQ9 949 aaKnown RBP12.29□□□□□ -0.44
CDH1-213ENST00000612417 P2RX4Q99571 388 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 VSIRQ9H7M9 311 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 TUBG2Q9NRH3 451 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 GNG13Q9P2W3 67 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 Q9UFV3 132 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 MIOXQ9UGB7 285 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 TIMM9Q9Y5J7 89 aa12.29□□□□□ -0.44
CDH1-213ENST00000612417 TMEM238LA0A1B0GVL6 79 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 OR3A1P47881 315 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 ZNF83P51522 516 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 UNQ6494/PRO21346Q6UXR6 183 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
CDH1-213ENST00000612417 TAF15Q92804 592 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDH1-213ENST00000612417 OR4C12Q96R67 309 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 ZNF665Q9H7R5 613 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 ZNF835Q9Y2P0 537 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 SLC25A15Q9Y619 301 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 CACNA1DQ01668 2161 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 ZNF727A8MUV8 499 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 CEBPDP49716 269 aaPredicted RBP12.28□□□□□ -0.44
CDH1-213ENST00000612417 SLC38A11Q08AI6 406 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 Q8WTZ3 238 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 C5orf30Q96GV9 206 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 OR2D2Q9H210 308 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 RBKSQ9H477 322 aa12.28□□□□□ -0.44
CDH1-213ENST00000612417 IGHV1-18A0A0C4DH31 117 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 RAMP3O60896 148 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 KITLGP21583 273 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 IL2RGP31785 369 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 GPX4P36969 197 aaPredicted RBP12.27□□□□□ -0.45
CDH1-213ENST00000612417 TAS2R60P59551 318 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 KLRB1Q12918 225 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 CATR1Q13166 79 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 SSX2Q16385 188 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 C21orf62-AS1Q17RA5 79 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 TIMM23BQ5SRD1 257 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 ACP7Q6ZNF0 438 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 SSX7Q7RTT5 188 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 CA5BP1Q8WTZ4 195 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 COQ2Q96H96 371 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 TMEM242Q9NWH2 141 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.45
CDH1-213ENST00000612417 A8MXE2 369 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 M0R1B8 84 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 IGLV1-44P01699 117 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 HBZP02008 142 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 NQO2P16083 231 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
CDH1-213ENST00000612417 DEFA6Q01524 100 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 PAX5Q02548 391 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 FAM27E3Q08E93 113 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 MRGPRGQ86SM5 289 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 TCTEX1D2Q8WW35 142 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 EDARADDQ8WWZ3 215 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 CADP27708 2225 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 IGHV2OR16-5A0A0B4J2B6 119 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 IGHV3-64DA0A0J9YX35 117 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 ZFP92A6NM28 416 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 LRRC30A6NM36 301 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 WNT9BO14905 357 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 SLC31A2O15432 143 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 ERVFRD-1P60508 538 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 RAB11AP62491 216 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 RPL30P62888 115 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms