RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 RHEBQ15382 184 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 FOXL2NBQ6ZUU3 175 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 SLC25A26Q70HW3 274 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZFP62Q8NB50 900 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 SH2D2AQ9NP31 389 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 NECAP2Q9NVZ3 263 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 CRIM1Q9NZV1 1036 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 ASH1LQ9NR48 2969 aaKnown RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 JTBO76095 146 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR2C1O95371 312 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 CTSDP07339 412 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 LYL1P12980 280 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 FKBP2P26885 142 aaKnown RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 S100GP29377 79 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 SSR4P51571 173 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF133P52736 654 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 TLE1Q04724 770 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 PRSS8Q16651 343 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 IZUMO4Q1ZYL8 232 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 RPS19BP1Q86WX3 136 aaKnown RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZBTB34Q8NCN2 500 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR1J1Q8NGS3 322 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 PKIBQ9C010 78 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF552Q9H707 407 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 NAA60Q9H7X0 242 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 ABI3Q9P2A4 366 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 PTPRQQ9UMZ3 2332 aa9.13□□□□□ -0.95
PCDHGC3-202ENST00000611950 GTF3C1Q12789 2109 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 TRGC2P03986 189 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 PRB1P04280 392 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 CELA3AP09093 270 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 PSG1P11464 419 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 DVL1P1P54792 670 aaPredicted RBP9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 DSCR4P56555 118 aaPredicted RBP9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 UBE2KP61086 200 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 RAB11AP62491 216 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 HIST1H3AP68431 136 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 PSG4Q00888 419 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 TMEM187Q14656 261 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 MRGPRGQ86SM5 289 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR1N2Q8NGR9 330 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 TM2D1Q9BX74 207 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 TMEM38BQ9NVV0 291 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 RNF115Q9Y4L5 304 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 DOCK11Q5JSL3 2073 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 NSG1A0A0A6YYJ2 146 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 NKX2-6A6NCS4 301 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF891A8MT65 544 aaPredicted RBP9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 UMAD1C9J7I0 102 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 SSSCA1O60232 199 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 AZU1P20160 251 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 BMP5P22003 454 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 CHATP28329 748 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 HERV-K104P61576 105 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 RPS23P62266 143 aaKnown RBP9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 RUNX1Q01196 453 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 INO80CQ6PI98 192 aaPredicted RBP9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 AAED1Q7RTV5 226 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 OSR2Q8N2R0 312 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR1F12Q8NHA8 337 aa9.12□□□□□ -0.95
PCDHGC3-202ENST00000611950 MED13Q9UHV7 2174 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 FOXG1P55316 489 aaPredicted RBP9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 CCL20P78556 96 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 EXT1Q16394 746 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF611Q8N823 705 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 FRZBQ92765 325 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 KIAA1549Q9HCM3 1950 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 NTN3O00634 580 aaPredicted RBP9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 HSD17B6O14756 317 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 WIPF1O43516 503 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 SYNGR3O43761 229 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF883P0CG24 379 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 DHRS13Q6UX07 377 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 Q6ZVH6 145 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR52L2PQ8NGH6 319 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR2Y1Q8NGV0 311 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF488Q96MN9 340 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 PARP11Q9NR21 331 aa9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 STRAPQ9Y3F4 350 aaKnown RBP9.11□□□□□ -0.95
PCDHGC3-202ENST00000611950 MGAQ8IWI9 3026 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF727A8MUV8 499 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 TAAR5O14804 337 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 SNCAP37840 140 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 GNMTQ14749 295 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 MMDQ15546 238 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 MUCL1Q96DR8 90 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 CIB3Q96Q77 187 aaPredicted RBP9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 SCTP09683 121 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 CRYGSP22914 178 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 B3GALT5-AS1P59052 145 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZFP36L1Q07352 338 aaKnown RBP9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 BAXQ07812 192 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 FAM27BQ5VT28 67 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 Q6ZSR3 168 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 MTURNQ8N3F0 131 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 OR10D3Q8NH80 312 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 FOXB1Q99853 325 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms