RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TAS2R45P59539 299 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 HERPUD1Q15011 391 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 LRRC75BQ2VPJ9 315 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 Q6ZT83 130 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 MYPOPQ86VE0 399 aaPredicted RBP7.34□□□□□ -1.23
LIG4-204ENST00000611712 SH2D2AQ9NP31 389 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 DVL1O14640 695 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 PGA5P0DJD9 388 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 IGHV1-2P23083 117 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 ERVFC1-1P60608 527 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 RHOBP62745 196 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 ERHP84090 104 aaKnown RBP7.34□□□□□ -1.23
LIG4-204ENST00000611712 SSX2Q16385 188 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 ACY3Q96HD9 319 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 FUT9Q9Y231 359 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 C17orf98A8MV24 154 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 MGST3O14880 152 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 RAB29O14966 203 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 MPV17P39210 176 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 CDX1P47902 265 aaPredicted RBP7.34□□□□□ -1.23
LIG4-204ENST00000611712 PMS2P11Q13670 270 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 C20orf204Q6ZNR8 217 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 COLCA1Q6ZS62 124 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 FDCSPQ8NFU4 85 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 TMEM204Q9BSN7 226 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 NGBQ9NPG2 151 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 PITPNC1Q9UKF7 332 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 CADP27708 2225 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 FREM1Q5H8C1 2179 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 ZNF891A8MT65 544 aaPredicted RBP7.34□□□□□ -1.24
LIG4-204ENST00000611712 PRR33A8MZF0 331 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 ATXN7O15265 892 aaPredicted RBP7.34□□□□□ -1.24
LIG4-204ENST00000611712 CLN5O75503 358 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 HPRT1P00492 218 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 CASP6P55212 293 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 B2MP61769 119 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 SRSF7Q16629 238 aaKnown RBP eCLIP7.34□□□□□ -1.24
LIG4-204ENST00000611712 SLC35E4Q6ICL7 350 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 VWA1Q6PCB0 445 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 DTX1Q86Y01 620 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 Q8WTZ3 238 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 LOXL4Q96JB6 756 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 OR51M1Q9H341 326 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 GP6Q9HCN6 339 aa7.34□□□□□ -1.24
LIG4-204ENST00000611712 POLEQ07864 2286 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 TRAV38-1A0A0B4J264 116 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 C10orf142B7Z368 130 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 KLK10O43240 276 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 IL18BPO95998 194 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 TFF1P04155 84 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 OR5G3P0C626 314 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 TRGC1P0CF51 173 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 KIR2DS2P43631 304 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 ZNF497Q6ZNH5 498 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 TCTEX1D1Q8N7M0 179 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 LILRB1Q8NHL6 650 aaPredicted RBP7.33□□□□□ -1.24
LIG4-204ENST00000611712 RHOVQ96L33 236 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 OR2V2Q96R30 315 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 DCTN5Q9BTE1 182 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 IGKV1-6A0A0C4DH72 117 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 A0A0G2JRQ6 117 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 HOXB1P14653 301 aaPredicted RBP7.33□□□□□ -1.24
LIG4-204ENST00000611712 NPY1RP25929 384 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 SUB1P53999 127 aaKnown RBP eCLIP7.33□□□□□ -1.24
LIG4-204ENST00000611712 VKORC1L1Q8N0U8 176 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 PCGF1Q9BSM1 259 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 SPINK4O60575 86 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 NDUFB4O95168 129 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 CD55P08174 381 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 CECR9P0C854 216 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 TNFRSF1AP19438 455 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 TNFSF10P50591 281 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 P2RY6Q15077 328 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 C10orf91Q5T1B1 145 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 ACP7Q6ZNF0 438 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 OR4P4Q8NGL7 312 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 PARLQ9H300 379 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 VSIRQ9H7M9 311 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 SLC35D1Q9NTN3 355 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 ACACAQ13085 2346 aa7.33□□□□□ -1.24
LIG4-204ENST00000611712 HEATR1Q9H583 2144 aaKnown RBP7.32□□□□□ -1.24
LIG4-204ENST00000611712 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 PDE6DO43924 150 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 RAMP3O60896 148 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 CRYABP02511 175 aaKnown RBP7.32□□□□□ -1.24
LIG4-204ENST00000611712 FOLR2P14207 255 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 THBS3P49746 956 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 SPCS3P61009 180 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 ZNF705AQ6ZN79 300 aaPredicted RBP7.32□□□□□ -1.24
LIG4-204ENST00000611712 Q6ZS49 121 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 OR13A1Q8NGR1 328 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 LEAP2Q969E1 77 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 SPRR3Q9UBC9 169 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 TMEM50AO95807 157 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 EGR1P18146 543 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 CD82P27701 267 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 OR10G8Q8NGN5 311 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 ITLN1Q8WWA0 313 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms