RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PSG5Q15238 335 aa11.34□□□□□ -0.59
HDDC2-204ENST00000608295 ZNF695Q8IW36 515 aa11.34□□□□□ -0.59
HDDC2-204ENST00000608295 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
HDDC2-204ENST00000608295 SAMD12Q8N8I0 201 aa11.34□□□□□ -0.59
HDDC2-204ENST00000608295 BVESQ8NE79 360 aa11.34□□□□□ -0.59
HDDC2-204ENST00000608295 NPBQ8NG41 125 aa11.34□□□□□ -0.59
HDDC2-204ENST00000608295 NAA50Q9GZZ1 169 aaKnown RBP11.34□□□□□ -0.59
HDDC2-204ENST00000608295 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDDC2-204ENST00000608295 IGKV1D-13A0A0B4J2D9 117 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 IGKV1-13P0DP09 117 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
HDDC2-204ENST00000608295 THBS3P49746 956 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 CX3CL1P78423 397 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 FOXE3Q13461 319 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 FOXB2Q5VYV0 432 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 COMMD1Q8N668 190 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 BEST4Q8NFU0 473 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 RAX2Q96IS3 184 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 KLK15Q9H2R5 256 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 SPATA2Q9UM82 520 aa11.33□□□□□ -0.6
HDDC2-204ENST00000608295 LINC00473A8K010 186 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 TUSC2O75896 110 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 CRYZL1O95825 349 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 IGHG4P01861 327 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 IGF1P05019 195 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 APELAP0DMC3 54 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 PITPNAQ00169 270 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 DEFA5Q01523 94 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 TAGLNQ01995 201 aaKnown RBP11.32□□□□□ -0.6
HDDC2-204ENST00000608295 PJVKQ0ZLH3 352 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 IDO2Q6ZQW0 420 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.32□□□□□ -0.6
HDDC2-204ENST00000608295 FLYWCH2Q96CP2 140 aaKnown RBP11.32□□□□□ -0.6
HDDC2-204ENST00000608295 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
HDDC2-204ENST00000608295 GHITMQ9H3K2 345 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 GNB4Q9HAV0 340 aa11.32□□□□□ -0.6
HDDC2-204ENST00000608295 SHOXO15266 292 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 RBBP9O75884 186 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 EIF4EP06730 217 aaKnown RBP11.31□□□□□ -0.6
HDDC2-204ENST00000608295 ELANEP08246 267 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 OR5H8P0DN80 308 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
HDDC2-204ENST00000608295 FXYD4P59646 89 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 CBX3Q13185 183 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 RTL8BQ17RB0 113 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 UBE2NLQ5JXB2 153 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 TMEM65Q6PI78 240 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 UNQ5815/PRO19632Q6UWF5 114 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 Q6ZS49 121 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 KCTD9Q7L273 389 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 OR13F1Q8NGS4 319 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 SECTM1Q8WVN6 248 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 MS4A10Q96PG2 267 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 TOLLIPQ9H0E2 274 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 ALX4Q9H161 411 aaPredicted RBP11.31□□□□□ -0.6
HDDC2-204ENST00000608295 AUNIPQ9H7T9 357 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 IFT46Q9NQC8 304 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 DIABLOQ9NR28 239 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 ZFP57Q9NU63 452 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
HDDC2-204ENST00000608295 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 ANXA10Q9UJ72 324 aa11.31□□□□□ -0.6
HDDC2-204ENST00000608295 CCL24O00175 119 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 TNFSF12O43508 249 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 SOX15O60248 233 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 FCGR3BO75015 233 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 AADACP22760 399 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 PSMB8P28062 276 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 DUTP33316 252 aaKnown RBP11.3□□□□□ -0.6
HDDC2-204ENST00000608295 TAS2R20P59543 309 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 RNASE12Q5GAN4 147 aaKnown RBP11.3□□□□□ -0.6
HDDC2-204ENST00000608295 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 GPR107Q5VW38 600 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 CNIH2Q6PI25 160 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 TMEM17Q86X19 198 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 ZNF645Q8N7E2 425 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 TCTEX1D2Q8WW35 142 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 DCUN1D5Q9BTE7 237 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 DCSTAMPQ9H295 470 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 TAS2R8Q9NYW2 309 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 OR2W1Q9Y3N9 320 aa11.3□□□□□ -0.6
HDDC2-204ENST00000608295 PRKDCP78527 4128 aaKnown RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 TRIM64CA6NLI5 447 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 SPDEFO95238 335 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 CNIH1O95406 144 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 DIRAS3O95661 229 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 IGLV2-23P01705 113 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 IGHV3-11P01762 117 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 EGR2P11161 476 aaPredicted RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 FCGR2CP31995 323 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 SCAND1P57086 179 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms