RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 UCNP55089 124 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 CCL8P80075 99 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 LYG1Q8N1E2 194 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 OR5D13Q8NGL4 314 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 TAF15Q92804 592 aaKnown RBP eCLIP8.82□□□□□ -1
CTCFL-216ENST00000608263 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 C18orf12Q96KH6 178 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 MS4A10Q96PG2 267 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 ZDHHC8Q9ULC8 765 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 TRAV34A0A0B4J273 112 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 PINLYPA6NC86 204 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 CA11O75493 328 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
CTCFL-216ENST00000608263 ACY3Q96HD9 319 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 CIB3Q96Q77 187 aaPredicted RBP8.82□□□□□ -1
CTCFL-216ENST00000608263 RNF122Q9H9V4 155 aa8.82□□□□□ -1
CTCFL-216ENST00000608263 NKX6-3A6NJ46 265 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 KIAA1324LA8MWY0 1029 aaPredicted RBP8.81□□□□□ -1
CTCFL-216ENST00000608263 CDX4O14627 284 aaPredicted RBP8.81□□□□□ -1
CTCFL-216ENST00000608263 NDUFB4O95168 129 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 GYPAP02724 150 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 PMCHP20382 165 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 HOXA6P31267 233 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 ASCL5Q7RTU5 278 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 SLC35E3Q7Z769 313 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 LEAP2Q969E1 77 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 BTF3L4Q96K17 158 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 UBTD1Q9HAC8 227 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 SIRT7Q9NRC8 400 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 DNAH14Q0VDD8 3507 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 LRRC3CA6NJW4 275 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 TOX4O94842 621 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 CYB5R3P00387 301 aaPredicted RBP8.81□□□□□ -1
CTCFL-216ENST00000608263 UCP3P55916 312 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 ERVFRD-1P60508 538 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 ICAM4Q14773 271 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 DBX2Q6ZNG2 339 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 DRAM1Q8N682 238 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 RAB24Q969Q5 203 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 R3HDM4Q96D70 268 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 PARD6AQ9NPB6 346 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 KLF7O75840 302 aaPredicted RBP8.81□□□□□ -1
CTCFL-216ENST00000608263 GLIPR1P48060 266 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 RSPO1Q2MKA7 263 aaPredicted RBP8.81□□□□□ -1
CTCFL-216ENST00000608263 FBXW9Q5XUX1 488 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 TXN2Q99757 166 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 DCTN5Q9BTE1 182 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
CTCFL-216ENST00000608263 S1PR2O95136 353 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 RNF224P0DH78 156 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 CRYGSP22914 178 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 UCP1P25874 307 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 SMIM21Q3B7S5 101 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 DTX1Q86Y01 620 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 NAV2Q8IVL1 2488 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 LILRA1O75019 489 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HBZP02008 142 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 OR5G3P0C626 314 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 RIPPLY2Q5TAB7 128 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 ZNF439Q8NDP4 499 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 C16orf97H3BN30 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 DNPH1O43598 174 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BKO60814 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 NDUFS6O75380 124 aaKnown RBP8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BJP06899 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 CELA3BP08861 270 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BOP23527 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 CTSSP25774 331 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BBP33778 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 SSTR5P35346 364 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BDP58876 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BCP62807 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST2H2BEQ16778 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.8□□□□□ -1
CTCFL-216ENST00000608263 BHLHA15Q7RTS1 189 aaPredicted RBP8.8□□□□□ -1
CTCFL-216ENST00000608263 OR4D5Q8NGN0 318 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 SGMS2Q8NHU3 365 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 GATAD1Q8WUU5 269 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BHQ93079 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BNQ99877 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 HIST1H2BMQ99879 126 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 PARLQ9H300 379 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 PITPNC1Q9UKF7 332 aa8.8□□□□□ -1
CTCFL-216ENST00000608263 A0A0G2JRQ6 117 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 ZNF716A6NP11 495 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 CD3EP07766 207 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 CFPP27918 469 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 NTF4P34130 210 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 KLF3P57682 345 aaPredicted RBP8.79□□□□□ -1
CTCFL-216ENST00000608263 HOXA4Q00056 320 aaPredicted RBP8.79□□□□□ -1
CTCFL-216ENST00000608263 ZFP36L1Q07352 338 aaKnown RBP8.79□□□□□ -1
CTCFL-216ENST00000608263 FAM214BQ7L5A3 538 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 MOB1BQ7L9L4 216 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 CLDND2Q8NHS1 167 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 TAAR6Q96RI8 345 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
CTCFL-216ENST00000608263 MED13Q9UHV7 2174 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 CTXND1A0A1B0GTU2 59 aa8.79□□□□□ -1
CTCFL-216ENST00000608263 LOC102723971A0A1B0GUV8 181 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms