RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 GAB2Q9UQC2 676 aa10.64□□□□□ -0.71
CTSA-218ENST00000607814 FBXO7Q9Y3I1 522 aa10.64□□□□□ -0.71
CTSA-218ENST00000607814 LSM4Q9Y4Z0 139 aaKnown RBP10.64□□□□□ -0.71
CTSA-218ENST00000607814 CSMD3Q7Z407 3707 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 MEIS3P1A6NDR6 274 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 VDAC1P21796 283 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 THBS3P49746 956 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 GNG2P59768 71 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 NCS1P62166 190 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 RPS16P62249 146 aaKnown RBP10.63□□□□□ -0.71
CTSA-218ENST00000607814 PLGLAQ15195 96 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 DEFB136Q30KP8 78 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 FAM71F2Q6NXP2 309 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 ETV3LQ6ZN32 361 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 GVQW1Q8N7I0 195 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 KLHL30-AS1Q8NEE0 82 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 NPBQ8NG41 125 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 OR5AN1Q8NGI8 311 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
CTSA-218ENST00000607814 FUNDC2Q9BWH2 189 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 KLK15Q9H2R5 256 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 TPSG1Q9NRR2 321 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 KIAA1456Q9P272 454 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 WASHC3Q9Y3C0 194 aa10.63□□□□□ -0.71
CTSA-218ENST00000607814 OR5H14A6NHG9 310 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 RRHO14718 337 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 NDUFA3O95167 84 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 TFAP2AP05549 437 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 SERPINB10P48595 397 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 VBP1P61758 197 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 PSG5Q15238 335 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 ECSCRQ19T08 205 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 H1FOOQ8IZA3 346 aaPredicted RBP10.62□□□□□ -0.71
CTSA-218ENST00000607814 ABHD5Q8WTS1 349 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 OR5B12Q96R08 314 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 NAA50Q9GZZ1 169 aaKnown RBP10.62□□□□□ -0.71
CTSA-218ENST00000607814 OR51J1Q9H342 316 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 VCX3AQ9NNX9 186 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
CTSA-218ENST00000607814 SMIM18P0DKX4 95 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 DTYMKP23919 212 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 MC5RP33032 325 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 MYCNOSP40205 109 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 RAB25P57735 213 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 CX3CL1P78423 397 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 CFHR3Q02985 330 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 BVESQ8NE79 360 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 TOLLIPQ9H0E2 274 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 METTL1Q9UBP6 276 aaKnown RBP10.61□□□□□ -0.71
CTSA-218ENST00000607814 SPATA2Q9UM82 520 aa10.61□□□□□ -0.71
CTSA-218ENST00000607814 HUWE1Q7Z6Z7 4374 aaKnown RBP10.61□□□□□ -0.71
CTSA-218ENST00000607814 IGKV1D-13A0A0B4J2D9 117 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 LCE6AA0A183 80 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 SLC25A17O43808 307 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 HLA-DRB1P01911 266 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 IGF1P05019 195 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 IGKV1-13P0DP09 117 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
CTSA-218ENST00000607814 PJVKQ0ZLH3 352 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 ARL6IP1Q15041 203 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 TIMM50Q3ZCQ8 353 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 CXorf66Q5JRM2 361 aaPredicted RBP10.6□□□□□ -0.71
CTSA-218ENST00000607814 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 RAX2Q96IS3 184 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 GHITMQ9H3K2 345 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 ZFP57Q9NU63 452 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 ETV7Q9Y603 341 aa10.6□□□□□ -0.71
CTSA-218ENST00000607814 TRAV41A0A0B4J266 112 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 TRIM64CA6NLI5 447 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 SRRM4A7MD48 611 aaKnown RBP10.59□□□□□ -0.71
CTSA-218ENST00000607814 LINC00473A8K010 186 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 SOX15O60248 233 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 CA2P00918 260 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 IGHG4P01861 327 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 APOA2P02652 100 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 PPIFP30405 207 aaKnown RBP10.59□□□□□ -0.71
CTSA-218ENST00000607814 GNB1P62873 340 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 FOXE3Q13461 319 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 SRSF7Q16629 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTSA-218ENST00000607814 OR2B11Q5JQS5 317 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 Q6ZS49 121 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 SAMD12Q8N8I0 201 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
CTSA-218ENST00000607814 P2RX4Q99571 388 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 DCSTAMPQ9H295 470 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 AUNIPQ9H7T9 357 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 GNB4Q9HAV0 340 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 ANXA10Q9UJ72 324 aa10.59□□□□□ -0.71
CTSA-218ENST00000607814 A0A1W2PN81 502 aa10.58□□□□□ -0.72
CTSA-218ENST00000607814 ARPC1BO15143 372 aaKnown RBP10.58□□□□□ -0.72
CTSA-218ENST00000607814 TUSC2O75896 110 aa10.58□□□□□ -0.72
CTSA-218ENST00000607814 IGLV2-23P01705 113 aa10.58□□□□□ -0.72
CTSA-218ENST00000607814 ELANEP08246 267 aa10.58□□□□□ -0.72
CTSA-218ENST00000607814 PSMB8P28062 276 aa10.58□□□□□ -0.72
CTSA-218ENST00000607814 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
CTSA-218ENST00000607814 CHRNA7P36544 502 aa10.58□□□□□ -0.72
CTSA-218ENST00000607814 RPL30P62888 115 aaKnown RBP10.58□□□□□ -0.72
CTSA-218ENST00000607814 PITPNAQ00169 270 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms