RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF107Q9UII5 783 aaPredicted RBP11.38□□□□□ -0.59
CTSA-211ENST00000606066 IFNA6P05013 189 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 PTBP1P26599 531 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTSA-211ENST00000606066 TAS2R19P59542 299 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 DGCR2P98153 550 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 CBX3Q13185 183 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 MSMO1Q15800 293 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 FBLN7Q53RD9 439 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 SPANXN2Q5MJ10 180 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 VAX1Q5SQQ9 334 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 GLDNQ6ZMI3 551 aaPredicted RBP11.37□□□□□ -0.59
CTSA-211ENST00000606066 TMEM17Q86X19 198 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 Q8N2B8 174 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 ZBTB34Q8NCN2 500 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 SECTM1Q8WVN6 248 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 RASL11BQ9BPW5 248 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 SOSTQ9BQB4 213 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
CTSA-211ENST00000606066 RBMX2Q9Y388 322 aaKnown RBP11.37□□□□□ -0.59
CTSA-211ENST00000606066 RNF114Q9Y508 228 aa11.37□□□□□ -0.59
CTSA-211ENST00000606066 TGP01266 2768 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 IGKV1D-13A0A0B4J2D9 117 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 A6NHS1 94 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 KCNAB3O43448 404 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 GSTZ1O43708 216 aaPredicted RBP11.36□□□□□ -0.59
CTSA-211ENST00000606066 CSF1P09603 554 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 IGKV1-13P0DP09 117 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 RRASP10301 218 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 FXYD4P59646 89 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 MMDQ15546 238 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 RTL8BQ17RB0 113 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 ABCA11PQ4W5N1 156 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 RNASE10Q5GAN6 216 aaKnown RBP11.36□□□□□ -0.59
CTSA-211ENST00000606066 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
CTSA-211ENST00000606066 SLC5A7Q9GZV3 580 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 SLC35D1Q9NTN3 355 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 KIAA1456Q9P272 454 aa11.36□□□□□ -0.59
CTSA-211ENST00000606066 PEX14O75381 377 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 CD3DP04234 171 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 AMY1AP04745 511 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 AMY2AP04746 511 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 DUTP33316 252 aaKnown RBP11.35□□□□□ -0.59
CTSA-211ENST00000606066 PYDC2Q56P42 97 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 C9orf152Q5JTZ5 239 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 PRR31Q5SQ13 230 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 ZNF660Q6AZW8 331 aaPredicted RBP11.35□□□□□ -0.59
CTSA-211ENST00000606066 LPCAT3Q6P1A2 487 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 ZNF66Q6ZN08 573 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 CCDC190Q86UF4 302 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 ARRDC1Q8N5I2 433 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 OR6Q1Q8NGQ2 317 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 MOB3AQ96BX8 217 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
CTSA-211ENST00000606066 CCL28Q9NRJ3 127 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 PLSCR3Q9NRY6 295 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 LIN7CQ9NUP9 197 aaKnown RBP11.35□□□□□ -0.59
CTSA-211ENST00000606066 PRELID3BQ9Y3B1 194 aa11.35□□□□□ -0.59
CTSA-211ENST00000606066 NBR2O15453 112 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 ETV6P41212 452 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 VDAC2P45880 294 aaPredicted RBP11.34□□□□□ -0.59
CTSA-211ENST00000606066 F2RL1P55085 397 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 PROK1P58294 105 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
CTSA-211ENST00000606066 MEF2DQ14814 521 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 Q8N9W7 124 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 NPBQ8NG41 125 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 C5orf30Q96GV9 206 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 TSNAXQ99598 290 aaKnown RBP11.34□□□□□ -0.59
CTSA-211ENST00000606066 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
CTSA-211ENST00000606066 M0QYG6 137 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 RAB3DO95716 219 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 CD74P04233 296 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 S100GP29377 79 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 LGALS7P47929 136 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 LINC00205P59089 165 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 CATR1Q13166 79 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 KCTD9Q7L273 389 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 CMTM1Q8IZ96 169 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 Q8N402 240 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 MFSD4AQ8N468 514 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 FAM71E2Q8N5Q1 922 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 BVESQ8NE79 360 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 TCTEX1D2Q8WW35 142 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 DDB2Q92466 427 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 RITA1Q96K30 269 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
CTSA-211ENST00000606066 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
CTSA-211ENST00000606066 SIGLEC9Q9Y336 463 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 V9GYH0 126 aa11.33□□□□□ -0.6
CTSA-211ENST00000606066 SH2D7A6NKC9 451 aaPredicted RBP11.32□□□□□ -0.6
CTSA-211ENST00000606066 LINC00473A8K010 186 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 DISC1C4P0D8 188 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms