RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 GNB4Q9HAV0 340 aa9.59□□□□□ -0.87
CTSA-210ENST00000606000 VCX3AQ9NNX9 186 aa9.59□□□□□ -0.87
CTSA-210ENST00000606000 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTSA-210ENST00000606000 RHBDL2Q9NX52 303 aa9.59□□□□□ -0.87
CTSA-210ENST00000606000 METTL1Q9UBP6 276 aaKnown RBP9.59□□□□□ -0.87
CTSA-210ENST00000606000 ZNF580Q9UK33 172 aa9.59□□□□□ -0.87
CTSA-210ENST00000606000 A0A1W2PN81 502 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 CCL24O00175 119 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 CA2P00918 260 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 PTHLHP12272 177 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 CHRNA7P36544 502 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 LSM3P62310 102 aaKnown RBP9.58□□□□□ -0.88
CTSA-210ENST00000606000 CX3CL1P78423 397 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 KIAA0141Q14154 515 aaPredicted RBP9.58□□□□□ -0.88
CTSA-210ENST00000606000 C19orf54Q5BKX5 351 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 HACD4Q5VWC8 232 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 PDPNQ86YL7 162 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 ABHD5Q8WTS1 349 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 GHITMQ9H3K2 345 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 SLC35D1Q9NTN3 355 aa9.58□□□□□ -0.88
CTSA-210ENST00000606000 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 TRIM64CA6NLI5 447 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 SLC25A17O43808 307 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 RBBP9O75884 186 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 IGLV2-23P01705 113 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 APOA2P02652 100 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 FCER2P06734 321 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 NFYAP23511 347 aaPredicted RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 DTYMKP23919 212 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 CDX1P47902 265 aaPredicted RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 SSBP2P81877 361 aaPredicted RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 ASPHD1Q5U4P2 390 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 Q6ZS49 121 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 MINDY2Q8NBR6 621 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 BVESQ8NE79 360 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 C4orf3Q8WVX3 66 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 YIPF6Q96EC8 236 aa9.57□□□□□ -0.88
CTSA-210ENST00000606000 ALX4Q9H161 411 aaPredicted RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 RBM7Q9Y580 266 aaKnown RBP9.57□□□□□ -0.88
CTSA-210ENST00000606000 TRAV18A0A075B6X5 111 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 IGKV1D-13A0A0B4J2D9 117 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 WI2-2373I1.2A0A1W2PRP0 233 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 LINC00473A8K010 186 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 K7EIL1 84 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 ARPC1BO15143 372 aaKnown RBP9.56□□□□□ -0.88
CTSA-210ENST00000606000 OR5H8P0DN80 308 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 IGKV1-13P0DP09 117 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 SLC6A1P30531 599 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
CTSA-210ENST00000606000 GNG2P59768 71 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 GNB1P62873 340 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 SRSF7Q16629 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTSA-210ENST00000606000 ZNF660Q6AZW8 331 aaPredicted RBP9.56□□□□□ -0.88
CTSA-210ENST00000606000 REC114Q7Z4M0 266 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 GVQW1Q8N7I0 195 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 ZNF491Q8N8L2 437 aa9.56□□□□□ -0.88
CTSA-210ENST00000606000 FLYWCH2Q96CP2 140 aaKnown RBP9.56□□□□□ -0.88
CTSA-210ENST00000606000 MRPS26Q9BYN8 205 aaKnown RBP9.56□□□□□ -0.88
CTSA-210ENST00000606000 SRRM4A7MD48 611 aaKnown RBP9.55□□□□□ -0.88
CTSA-210ENST00000606000 I3L521 148 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 AIREO43918 545 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 DUS4LO95620 317 aaKnown RBP9.55□□□□□ -0.88
CTSA-210ENST00000606000 DIRAS3O95661 229 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 DUTP33316 252 aaKnown RBP9.55□□□□□ -0.88
CTSA-210ENST00000606000 RAB9AP51151 201 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 CRIP2P52943 208 aaPredicted RBP9.55□□□□□ -0.88
CTSA-210ENST00000606000 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 FHL3Q13643 280 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 ARL6IP1Q15041 203 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 DMRTA1Q5VZB9 504 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 TMEM65Q6PI78 240 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 UNQ5815/PRO19632Q6UWF5 114 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 PPP1R27Q86WC6 154 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 LFNGQ8NES3 379 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 GRPEL2Q8TAA5 225 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 DDB2Q92466 427 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 HARBI1Q96MB7 349 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 TSNAXQ99598 290 aaKnown RBP9.55□□□□□ -0.88
CTSA-210ENST00000606000 RNF5Q99942 180 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 FOXA2Q9Y261 457 aaPredicted RBP9.55□□□□□ -0.88
CTSA-210ENST00000606000 NUBP2Q9Y5Y2 271 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 ETV7Q9Y603 341 aa9.55□□□□□ -0.88
CTSA-210ENST00000606000 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 MEIS3P1A6NDR6 274 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 SPDEFO95238 335 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 IGLV2-14P01704 120 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 CRYGBP07316 175 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 RPS19P39019 145 aaKnown RBP9.54□□□□□ -0.88
CTSA-210ENST00000606000 DEFA5Q01523 94 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 MRGPRG-AS1Q2M3A8 158 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 OR2B11Q5JQS5 317 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 ARPC1AQ92747 370 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 UBE2E2Q96LR5 201 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 MS4A10Q96PG2 267 aa9.54□□□□□ -0.88
CTSA-210ENST00000606000 GPHA2Q96T91 129 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms