RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 S100A16Q96FQ6 103 aaKnown RBP11.31□□□□□ -0.6
TUBE1-208ENST00000604743 NAA50Q9GZZ1 169 aaKnown RBP11.31□□□□□ -0.6
TUBE1-208ENST00000604743 AUNIPQ9H7T9 357 aa11.31□□□□□ -0.6
TUBE1-208ENST00000604743 ZFP57Q9NU63 452 aa11.31□□□□□ -0.6
TUBE1-208ENST00000604743 METTL1Q9UBP6 276 aaKnown RBP11.31□□□□□ -0.6
TUBE1-208ENST00000604743 ANXA10Q9UJ72 324 aa11.31□□□□□ -0.6
TUBE1-208ENST00000604743 GAB2Q9UQC2 676 aa11.31□□□□□ -0.6
TUBE1-208ENST00000604743 A3GALT2U3KPV4 340 aa11.31□□□□□ -0.6
TUBE1-208ENST00000604743 A0A0A6YYH2 397 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 A6NJ64 397 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
TUBE1-208ENST00000604743 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 BVESQ8NE79 360 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 BEST4Q8NFU0 473 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
TUBE1-208ENST00000604743 RNF5Q99942 180 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 COMMD3Q9UBI1 195 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 OR2W1Q9Y3N9 320 aa11.3□□□□□ -0.6
TUBE1-208ENST00000604743 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 SLC25A17O43808 307 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 ELANEP08246 267 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 OR5H8P0DN80 308 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 IGLL1P15814 213 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 THBS3P49746 956 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 CX3CL1P78423 397 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 NDPQ00604 133 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 CFHR3Q02985 330 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 CBX3Q13185 183 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 FOXE3Q13461 319 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 TMEM69Q5SWH9 247 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 SAMD5Q5TGI4 173 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 GPR107Q5VW38 600 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
TUBE1-208ENST00000604743 ZNF695Q8IW36 515 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 FAM103A1Q9BTL3 118 aaKnown RBP11.29□□□□□ -0.6
TUBE1-208ENST00000604743 MRPS26Q9BYN8 205 aaKnown RBP11.29□□□□□ -0.6
TUBE1-208ENST00000604743 FBXO7Q9Y3I1 522 aa11.29□□□□□ -0.6
TUBE1-208ENST00000604743 IGKV1D-13A0A0B4J2D9 117 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 SHOXO15266 292 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 XRCC3O43542 346 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 TUSC2O75896 110 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 CA2P00918 260 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 IGHG4P01861 327 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 HLA-DQB1P01920 261 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 IGKV1-13P0DP09 117 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
TUBE1-208ENST00000604743 RTL8BQ17RB0 113 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 TMEM65Q6PI78 240 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 ETV3LQ6ZN32 361 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 ZNF645Q8N7E2 425 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 HARBI1Q96MB7 349 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 IFT46Q9NQC8 304 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 TPSG1Q9NRR2 321 aa11.28□□□□□ -0.6
TUBE1-208ENST00000604743 A0A1W2PN81 502 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 LINC00473A8K010 186 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
TUBE1-208ENST00000604743 EIF4EP06730 217 aaKnown RBP11.27□□□□□ -0.61
TUBE1-208ENST00000604743 FCGR2CP31995 323 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 CHRNA7P36544 502 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 CBX5P45973 191 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 RAB25P57735 213 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 TAS2R20P59543 309 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 GNB1P62873 340 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 BEAN1Q3B7T3 259 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 GPR141Q7Z602 305 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 ANKRD13BQ86YJ7 626 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 MRPL41Q8IXM3 137 aaKnown RBP11.27□□□□□ -0.61
TUBE1-208ENST00000604743 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
TUBE1-208ENST00000604743 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 KLK15Q9H2R5 256 aa11.27□□□□□ -0.61
TUBE1-208ENST00000604743 MRPS7Q9Y2R9 242 aaKnown RBP11.27□□□□□ -0.61
TUBE1-208ENST00000604743 FCGR3BO75015 233 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 SPDEFO95238 335 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 CRYZL1O95825 349 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 RRASP10301 218 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 AADACP22760 399 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 PSMB8P28062 276 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
TUBE1-208ENST00000604743 MYCNOSP40205 109 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
TUBE1-208ENST00000604743 LGALS7P47929 136 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 RORCP51449 518 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 TAGLNQ01995 201 aaKnown RBP11.26□□□□□ -0.61
TUBE1-208ENST00000604743 PDLIM3Q53GG5 364 aaPredicted RBP11.26□□□□□ -0.61
TUBE1-208ENST00000604743 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 LINC00482Q8N8I6 264 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 WFDC9Q8NEX5 89 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 CASTOR1Q8WTX7 329 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 SECTM1Q8WVN6 248 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 SNAPC3Q92966 411 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
TUBE1-208ENST00000604743 DCUN1D5Q9BTE7 237 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms