RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 ELF5Q9UKW6 265 aaPredicted RBP18.62■□□□□ 0.57
SSX2IP-209ENST00000603677 TRAV18A0A075B6X5 111 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 XRCC3O43542 346 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 HLA-DQB1P01920 261 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 LUMP51884 338 aaPredicted RBP18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 RPS16P62249 146 aaKnown RBP18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 RTL8BQ17RB0 113 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 OR13F1Q8NGS4 319 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 NUDCD2Q8WVJ2 157 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 MAFIPQ8WZ33 124 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 SLC25A46Q96AG3 418 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 SLC35D1Q9NTN3 355 aa18.61■□□□□ 0.57
SSX2IP-209ENST00000603677 TRAV41A0A0B4J266 112 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 NUDT19A8MXV4 375 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 G3V4G9 280 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 ATP6V0E1O15342 81 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 IGLV1-40P01703 118 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 IGKV1-16P04430 117 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 CX3CL1P78423 397 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 PSG5Q15238 335 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 MSMO1Q15800 293 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 TMEM177Q53S58 311 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 UBE2NLQ5JXB2 153 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 PYHIN1Q6K0P9 492 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 TMEM65Q6PI78 240 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 ZNF645Q8N7E2 425 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 DRAXINQ8NBI3 349 aaPredicted RBP18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 MINDY2Q8NBR6 621 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 KLHL30-AS1Q8NEE0 82 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 MYOZ3Q8TDC0 251 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 UBE2E2Q96LR5 201 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 FBXL15Q9H469 300 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 AUNIPQ9H7T9 357 aa18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 METTL1Q9UBP6 276 aaKnown RBP18.6■□□□□ 0.57
SSX2IP-209ENST00000603677 IGKV1D-8A0A087WSZ0 117 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 SSX5O60225 188 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 AKIRIN2Q53H80 203 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 HOGA1Q86XE5 327 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 LINC00482Q8N8I6 264 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 ACOT12Q8WYK0 555 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 TMEM68Q96MH6 324 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 P2RX4Q99571 388 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 FUNDC2Q9BWH2 189 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 PARP11Q9NR21 331 aa18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 ZMAT5Q9UDW3 170 aaKnown RBP18.59■□□□□ 0.57
SSX2IP-209ENST00000603677 RPLP1P05386 114 aaKnown RBP18.58■□□□□ 0.56
SSX2IP-209ENST00000603677 DUTP33316 252 aaKnown RBP18.58■□□□□ 0.56
SSX2IP-209ENST00000603677 BEST4Q8NFU0 473 aa18.58■□□□□ 0.56
SSX2IP-209ENST00000603677 OSR1Q8TAX0 266 aaPredicted RBP18.58■□□□□ 0.56
SSX2IP-209ENST00000603677 C4orf3Q8WVX3 66 aa18.58■□□□□ 0.56
SSX2IP-209ENST00000603677 NUBP2Q9Y5Y2 271 aa18.58■□□□□ 0.56
SSX2IP-209ENST00000603677 TUSC2O75896 110 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 RUNX1Q01196 453 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 C19orf54Q5BKX5 351 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 PPP1R27Q86WC6 154 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 OR5M8Q8NGP6 311 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 DDB2Q92466 427 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 NECAP2Q9NVZ3 263 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 PRELID3BQ9Y3B1 194 aa18.57■□□□□ 0.56
SSX2IP-209ENST00000603677 CD40LGP29965 261 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 ARPC4P59998 168 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 OXLD1Q5BKU9 147 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 ETV3LQ6ZN32 361 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 C8orf86Q6ZUL3 223 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 ANKRD13BQ86YJ7 626 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 C1QL4Q86Z23 238 aa18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 MRPL41Q8IXM3 137 aaKnown RBP18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 HSD17B10Q99714 261 aaKnown RBP18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 FOXA2Q9Y261 457 aaPredicted RBP18.56■□□□□ 0.56
SSX2IP-209ENST00000603677 CCL24O00175 119 aa18.55■□□□□ 0.56
SSX2IP-209ENST00000603677 TEX45Q8NA69 505 aa18.55■□□□□ 0.56
SSX2IP-209ENST00000603677 ZBTB34Q8NCN2 500 aa18.55■□□□□ 0.56
SSX2IP-209ENST00000603677 HARBI1Q96MB7 349 aa18.55■□□□□ 0.56
SSX2IP-209ENST00000603677 VSIG4Q9Y279 399 aa18.55■□□□□ 0.56
SSX2IP-209ENST00000603677 SHOXO15266 292 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 CREBL2O60519 120 aaPredicted RBP18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 RAB9AP51151 201 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 LSM3P62310 102 aaKnown RBP18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 OVCH2Q7RTZ1 564 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 SAMD12Q8N8I0 201 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 ZNF491Q8N8L2 437 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 OR5AP2Q8NGF4 316 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 BORCS5Q969J3 196 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 MRPS7Q9Y2R9 242 aaKnown RBP18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 RBMX2Q9Y388 322 aaKnown RBP18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 WSB1Q9Y6I7 421 aa18.54■□□□□ 0.56
SSX2IP-209ENST00000603677 G3V318 75 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 FCN1O00602 326 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 SLC25A17O43808 307 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 IGLV2-23P01705 113 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 APOA1P02647 267 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 CRYGBP07316 175 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 NFYAP23511 347 aaPredicted RBP18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 VMA21Q3ZAQ7 101 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 TMEM69Q5SWH9 247 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 ZNF66Q6ZN08 573 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 BVESQ8NE79 360 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 DPF1Q92782 380 aa18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 RBMXL1Q96E39 390 aaKnown RBP18.53■□□□□ 0.56
SSX2IP-209ENST00000603677 MRPS26Q9BYN8 205 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms