RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	CLEC2D	Q9UHP7	191 aa		13.74	□□□□□ -0.21
IRF3-231	ENST00000602190	CNIH1	O95406	144 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	UBB	P0CG47	229 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	HTR2C	P28335	458 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	LGALS7	P47929	136 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	RPS16	P62249	146 aa	Known RBP	13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	QRFP	P83859	136 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	C1orf100	Q5SVJ3	147 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	WFDC3	Q8IUB2	231 aa		13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.73	□□□□□ -0.21
IRF3-231	ENST00000602190	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.73	□□□□□ -0.21
IRF3-231	ENST00000602190		A0A1W2PPK0	400 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	OR11H12	B2RN74	326 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	LY6G6C	O95867	125 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	ZBTB25	P24278	435 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	KIR2DS2	P43631	304 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	RASSF2	P50749	326 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	HLA-DRB3	P79483	266 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	UNC119	Q13432	240 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	ZFP41	Q8N8Y5	198 aa		13.72	□□□□□ -0.21
IRF3-231	ENST00000602190	RIMS4	Q9H426	269 aa	Predicted RBP	13.72	□□□□□ -0.21
IRF3-231	ENST00000602190		A0A0A6YYD4	124 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	IGKV1-6	A0A0C4DH72	117 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	NUPR2	A6NF83	97 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	TMEM14DP	A8MWL7	114 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	ATF4	P18848	351 aa	Predicted RBP	13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	CEACAM6	P40199	344 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	TMEM177	Q53S58	311 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	OR10K2	Q6IF99	312 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	NICN1	Q9BSH3	213 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	ST6GALNAC5	Q9BVH7	336 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	TMEM59	Q9BXS4	323 aa		13.71	□□□□□ -0.21
IRF3-231	ENST00000602190	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	IRGM	A1A4Y4	181 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	FAM223B	A6NKX1	122 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	SRRM4	A7MD48	611 aa	Known RBP	13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	APOA2	P02652	100 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	ZNF45	Q02386	682 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	FAM223A	Q8IWN6	122 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	THRSP	Q92748	146 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	AKIP1	Q9NQ31	210 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	SLC35D1	Q9NTN3	355 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	TECR	Q9NZ01	308 aa	Known RBP	13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	MGAT4A	Q9UM21	535 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190	KIAA1109	Q2LD37	5005 aa		13.7	□□□□□ -0.22
IRF3-231	ENST00000602190		A0A0B4J203	849 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	C2orf70	A6NJV1	201 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	LGALS9	O00182	355 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	DYNC1I1	O14576	645 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	ATP5H	O75947	161 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	OR9G9	P0C7N8	305 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	TAS2R43	P59537	309 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	TNFRSF9	Q07011	255 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	ZFP1	Q6P2D0	407 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	FAM89B	Q8N5H3	189 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	KCNG3	Q8TAE7	436 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	C5orf30	Q96GV9	206 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	C9orf16	Q9BUW7	83 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190		Q9N2K0	584 aa		13.69	□□□□□ -0.22
IRF3-231	ENST00000602190	SCT	P09683	121 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	MYL12A	P19105	171 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	EDN2	P20800	178 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	LRRTM1	Q86UE6	522 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	RPP25L	Q8N5L8	163 aa	Known RBP	13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	DDB2	Q92466	427 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	KCTD12	Q96CX2	325 aa	Known RBP	13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	COA4	Q9NYJ1	87 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	ZNF221	Q9UK13	617 aa		13.68	□□□□□ -0.22
IRF3-231	ENST00000602190	FOLR2	P14207	255 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	RHOG	P84095	191 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	EXOSC2	Q13868	293 aa	Known RBP	13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	FAM209B	Q5JX69	171 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	WDR89	Q96FK6	387 aa	Predicted RBP	13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	HARBI1	Q96MB7	349 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	LPAR5	Q9H1C0	372 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	AK3	Q9UIJ7	227 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	HSF4	Q9ULV5	492 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	TP53TG1	Q9Y2A0	90 aa		13.67	□□□□□ -0.22
IRF3-231	ENST00000602190	MSGN1	A6NI15	193 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	SRM	P19623	302 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	MAPK3	P27361	379 aa	Predicted RBP	13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	TAGLN	Q01995	201 aa	Known RBP	13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	PRSS8	Q16651	343 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	KLK9	Q2XQG4	91 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	TEX45	Q8NA69	505 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	SRSF12	Q8WXF0	261 aa	Known RBP	13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	PHYHIP	Q92561	330 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	TMEM80	Q96HE8	168 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	GGTLC1	Q9BX51	225 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	KCNK15	Q9H427	330 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	RDH8	Q9NYR8	311 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190	KLK9	Q9UKQ9	250 aa		13.66	□□□□□ -0.22
IRF3-231	ENST00000602190		A8MWP6	167 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190		M0R1X1	148 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	CIB2	O75838	187 aa		13.65	□□□□□ -0.22

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