RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LRRC37A5PQ49AS3 106 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 THOC7Q6I9Y2 204 aaKnown RBP14.68□□□□□ -0.06
VRK3-225ENST00000601912 C1orf229Q6ZS94 237 aaPredicted RBP14.68□□□□□ -0.06
VRK3-225ENST00000601912 LSM10Q969L4 123 aaKnown RBP14.68□□□□□ -0.06
VRK3-225ENST00000601912 RRNAD1Q96FB5 475 aaKnown RBP14.68□□□□□ -0.06
VRK3-225ENST00000601912 POLR3KQ9Y2Y1 108 aaPredicted RBP14.68□□□□□ -0.06
VRK3-225ENST00000601912 G3V3Q6 166 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 RBFOX2O43251 390 aaKnown RBP eCLIP14.67□□□□□ -0.06
VRK3-225ENST00000601912 COX7A1P24310 79 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 PSMB6P28072 239 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 ZNF137PP52743 207 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 ZNF816Q0VGE8 651 aaPredicted RBP14.67□□□□□ -0.06
VRK3-225ENST00000601912 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 ZBTB8BQ8NAP8 495 aaPredicted RBP14.67□□□□□ -0.06
VRK3-225ENST00000601912 SIRT7Q9NRC8 400 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 AMMECR1Q9Y4X0 333 aaPredicted RBP14.67□□□□□ -0.06
VRK3-225ENST00000601912 ARHGAP32A7KAX9 2087 aa14.67□□□□□ -0.06
VRK3-225ENST00000601912 FAM157AC9JC47 383 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 HPRT1P00492 218 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 IGKV1-39P01597 117 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 IGLV1-47P01700 117 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 IGKV1D-39P04432 117 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 USF1P22415 310 aaPredicted RBP14.66□□□□□ -0.06
VRK3-225ENST00000601912 BRWD1-AS2P59051 145 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 HLA-DRB5Q30154 266 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 NMSQ5H8A3 153 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 PNKDQ8N490 385 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 OR11H4Q8NGC9 324 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 THAP6Q8TBB0 222 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 DDB2Q92466 427 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 MBD6Q96DN6 1003 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 UNKLQ9H9P5 680 aaKnown RBP14.66□□□□□ -0.06
VRK3-225ENST00000601912 PLEKHA2Q9HB19 425 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 MMP26Q9NRE1 261 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 CENPEQ02224 2701 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 FBN2P35556 2912 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 CELSR2Q9HCU4 2923 aa14.66□□□□□ -0.06
VRK3-225ENST00000601912 SNAPC5O75971 98 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 MPC2O95563 127 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 PET100P0DJ07 73 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 DLX1P56177 255 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 TAGLNQ01995 201 aaKnown RBP14.65□□□□□ -0.06
VRK3-225ENST00000601912 ZNF383Q8NA42 475 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 OR4S2Q8NH73 311 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 ZFP57Q9NU63 452 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 S1PR2O95136 353 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 CT45A6P0DMU7 189 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 CT45A5P0DMU8 189 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 CT45A7P0DMV0 189 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 SLC25A6P12236 298 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 DVL1P1P54792 670 aaPredicted RBP14.65□□□□□ -0.06
VRK3-225ENST00000601912 IL15RAQ13261 267 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 RTL8BQ17RB0 113 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 C11orf87Q6NUJ2 197 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 VMO1Q7Z5L0 202 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 TGIF2LXQ8IUE1 241 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 FAM219AQ8IW50 185 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 OR11H6Q8NGC7 330 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 ST6GALNAC6Q969X2 333 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 LPAR2Q9HBW0 351 aa14.65□□□□□ -0.06
VRK3-225ENST00000601912 ANKRD17O75179 2603 aaKnown RBP14.64□□□□□ -0.07
VRK3-225ENST00000601912 FXYD6-FXYD2A0A087WZ82 144 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 TRAV14DV4A0A0A6YYC5 116 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 A0A1B0GU03 582 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 BUB1B-PAK6H3BSN5 160 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 TOX4O94842 621 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 KRASP01116 189 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 APOA2P02652 100 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 PRB3Q04118 309 aaPredicted RBP14.64□□□□□ -0.07
VRK3-225ENST00000601912 GPR146Q96CH1 333 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 MRPL20Q9BYC9 149 aaKnown RBP14.64□□□□□ -0.07
VRK3-225ENST00000601912 SIRPDQ9H106 197 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 MMP24Q9Y5R2 645 aa14.64□□□□□ -0.07
VRK3-225ENST00000601912 HMSDA8MTL9 139 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 SCGB1D2O95969 90 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 IGKV1-5P01602 117 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 ARG1P05089 322 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 RRASP10301 218 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 SLC25A4P12235 298 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 EPHA1P21709 976 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 G6PCP35575 357 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 S100A10P60903 97 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 RAB32Q13637 225 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 SMCO1Q147U7 214 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 DHRS7BQ6IAN0 325 aaPredicted RBP14.63□□□□□ -0.07
VRK3-225ENST00000601912 OR4P4Q8NGL7 312 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 GRPEL2Q8TAA5 225 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 PCGF1Q9BSM1 259 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 SLC35D1Q9NTN3 355 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 MED13LQ71F56 2210 aa14.63□□□□□ -0.07
VRK3-225ENST00000601912 RLN2P04090 185 aa14.62□□□□□ -0.07
VRK3-225ENST00000601912 REG1BP48304 166 aa14.62□□□□□ -0.07
VRK3-225ENST00000601912 ERVK-16P61578 105 aa14.62□□□□□ -0.07
VRK3-225ENST00000601912 R3HDM4Q96D70 268 aa14.62□□□□□ -0.07
VRK3-225ENST00000601912 INSIG2Q9Y5U4 225 aa14.62□□□□□ -0.07
VRK3-225ENST00000601912 ABCA12Q86UK0 2595 aa14.62□□□□□ -0.07
VRK3-225ENST00000601912 A0A0G2JRQ6 117 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 MARCH11A6NNE9 402 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 TXNL1O43396 289 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 CRYZL1O95825 349 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms