RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 PRELID3BQ9Y3B1 194 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 TSPAN15O95858 294 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 CXorf66Q5JRM2 361 aaPredicted RBP15.29■□□□□ 0.04
UPF1-212ENST00000601689 GVQW1Q8N7I0 195 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 ZNF383Q8NA42 475 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 OR5AP2Q8NGF4 316 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 C15orf40Q8WUR7 153 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 BORCS5Q969J3 196 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 NAA50Q9GZZ1 169 aaKnown RBP15.29■□□□□ 0.04
UPF1-212ENST00000601689 LINC00527Q9UJ94 153 aa15.29■□□□□ 0.04
UPF1-212ENST00000601689 TRRAPQ9Y4A5 3859 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 A0A1W2PRX2 142 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 SHOXO15266 292 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 HLA-DQB1P01920 261 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 SLC6A1P30531 599 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 TMBIM6P55061 237 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 TAS2R46P59540 309 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 TMEM267Q0VDI3 215 aaPredicted RBP15.28■□□□□ 0.04
UPF1-212ENST00000601689 ZNF660Q6AZW8 331 aaPredicted RBP15.28■□□□□ 0.04
UPF1-212ENST00000601689 ABHD5Q8WTS1 349 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 OR51J1Q9H342 316 aa15.28■□□□□ 0.04
UPF1-212ENST00000601689 METTL1Q9UBP6 276 aaKnown RBP15.28■□□□□ 0.04
UPF1-212ENST00000601689 WNK1Q9H4A3 2382 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 TUSC2O75896 110 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 PF4P02776 101 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 IGF1P05019 195 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 EIF4EP06730 217 aaKnown RBP15.27■□□□□ 0.04
UPF1-212ENST00000601689 CNTFRP26992 372 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 CD40LGP29965 261 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 FCGR2CP31995 323 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 CDK10Q15131 360 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 TMEM65Q6PI78 240 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 RITA1Q96K30 269 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 HARBI1Q96MB7 349 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 HSD17B10Q99714 261 aaKnown RBP15.27■□□□□ 0.04
UPF1-212ENST00000601689 DCUN1D5Q9BTE7 237 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 FBXL15Q9H469 300 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 SCPEP1Q9HB40 452 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 PARP11Q9NR21 331 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 ZNF580Q9UK33 172 aa15.27■□□□□ 0.04
UPF1-212ENST00000601689 MEIS3P1A6NDR6 274 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 NUDT19A8MXV4 375 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 SULT1C2O00338 296 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 RGS5O15539 181 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 HPGDSO60760 199 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 PROP1O75360 226 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 ELANEP08246 267 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 HERV-K104P61576 105 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 ZBTB34Q8NCN2 500 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 BVESQ8NE79 360 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 OR5H2Q8NGV7 314 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 HSPB9Q9BQS6 159 aa15.26■□□□□ 0.03
UPF1-212ENST00000601689 LINC01548A6NM66 108 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 CREBL2O60519 120 aaPredicted RBP15.25■□□□□ 0.03
UPF1-212ENST00000601689 IGKV1-16P04430 117 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 FCER2P06734 321 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 PTHLHP12272 177 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 DUTP33316 252 aaKnown RBP15.25■□□□□ 0.03
UPF1-212ENST00000601689 FOXE3Q13461 319 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 PSG5Q15238 335 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 VMA21Q3ZAQ7 101 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 KCTD9Q7L273 389 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 SNX29P2Q8IUI4 249 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 TCTEX1D1Q8N7M0 179 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 SECTM1Q8WVN6 248 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 EHFQ9NZC4 300 aa15.25■□□□□ 0.03
UPF1-212ENST00000601689 RBMX2Q9Y388 322 aaKnown RBP15.25■□□□□ 0.03
UPF1-212ENST00000601689 IGHV7-81A0A0B4J1V7 117 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 TPPPO94811 219 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 PPYP01298 95 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 ELK1P19419 428 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 MSMO1Q15800 293 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 ZNF562Q6V9R5 426 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 ZNF66Q6ZN08 573 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 OSR1Q8TAX0 266 aaPredicted RBP15.24■□□□□ 0.03
UPF1-212ENST00000601689 GIMAP1Q8WWP7 306 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 CLCC1Q96S66 551 aa15.24■□□□□ 0.03
UPF1-212ENST00000601689 FBN3Q75N90 2809 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 TRAV41A0A0B4J266 112 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 CCDC160A6NGH7 325 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 ATP6V0E1O15342 81 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 SLC25A17O43808 307 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 CNIH1O95406 144 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 CRYZL1O95825 349 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 AADACP22760 399 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 S100GP29377 79 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 LINC00205P59089 165 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 FXYD4P59646 89 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 TSPAN5P62079 268 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 RPL23AP62750 156 aaKnown RBP15.23■□□□□ 0.03
UPF1-212ENST00000601689 CATR1Q13166 79 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 TMEM177Q53S58 311 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 HIST2H2BDQ6DRA6 164 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 C10orf99Q6UWK7 81 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 PPP1R27Q86WC6 154 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 TCTEX1D2Q8WW35 142 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 AIFM2Q9BRQ8 373 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 SLC5A7Q9GZV3 580 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 EXTL2Q9UBQ6 330 aa15.23■□□□□ 0.03
UPF1-212ENST00000601689 FCGR3BO75015 233 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms