RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 ST6GALNAC5Q9BVH7 336 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 DIMT1Q9UNQ2 313 aaKnown RBP12.63□□□□□ -0.39
USE1-208ENST00000600970 A0A0B4J203 849 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 BMPR1BO00238 502 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 MYL12AP19105 171 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 ZBTB25P24278 435 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 RPS27AP62979 156 aaKnown RBP12.62□□□□□ -0.39
USE1-208ENST00000600970 PTX4Q96A99 478 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 NICN1Q9BSH3 213 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 SLC35D1Q9NTN3 355 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 ZNF221Q9UK13 617 aa12.62□□□□□ -0.39
USE1-208ENST00000600970 TRBV6-6A0A0A6YYG2 114 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 IRGMA1A4Y4 181 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 UBBP0CG47 229 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 APELAP0DMC3 54 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 DYNLRB2Q8TF09 96 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 DDB2Q92466 427 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 TMEM59Q9BXS4 323 aa12.61□□□□□ -0.39
USE1-208ENST00000600970 M0R1X1 148 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 ATP5HO75947 161 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 SCTP09683 121 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 EDN2P20800 178 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 PMS2P11Q13670 270 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 GUCA2BQ16661 112 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 MRGPRG-AS1Q2M3A8 158 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 ADAD2Q8NCV1 583 aaKnown RBP12.6□□□□□ -0.39
USE1-208ENST00000600970 PHB2Q99623 299 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 OVOL2Q9BRP0 275 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 HDHD3Q9BSH5 251 aaPredicted RBP12.6□□□□□ -0.39
USE1-208ENST00000600970 C9orf16Q9BUW7 83 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 ZC4H2Q9NQZ6 224 aa12.6□□□□□ -0.39
USE1-208ENST00000600970 CXorf65A6NEN9 183 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 MSGN1A6NI15 193 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 KIR2DS2P43631 304 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 UNC119Q13432 240 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 EXOSC2Q13868 293 aaKnown RBP12.59□□□□□ -0.39
USE1-208ENST00000600970 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
USE1-208ENST00000600970 TMEM80Q96HE8 168 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 HARBI1Q96MB7 349 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 RIMS4Q9H426 269 aaPredicted RBP12.59□□□□□ -0.39
USE1-208ENST00000600970 AKIP1Q9NQ31 210 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 PLEKHJ1Q9NW61 149 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
USE1-208ENST00000600970 AK3Q9UIJ7 227 aa12.59□□□□□ -0.39
USE1-208ENST00000600970 A0A0A6YYD4 124 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 NUPR2A6NF83 97 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 FOLR2P14207 255 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 TAS2R43P59537 309 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 RHOGP84095 191 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 MED21Q13503 144 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 ZFP1Q6P2D0 407 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 KCNG3Q8TAE7 436 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 Q9N2K0 584 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 PCLOQ9Y6V0 5065 aa12.58□□□□□ -0.4
USE1-208ENST00000600970 DNAH10Q8IVF4 4471 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.57□□□□□ -0.4
USE1-208ENST00000600970 IGKV1-6A0A0C4DH72 117 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 FAM223BA6NKX1 122 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 SRRM4A7MD48 611 aaKnown RBP12.57□□□□□ -0.4
USE1-208ENST00000600970 TMEM14DPA8MWL7 114 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 PRH1P02810 166 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 CD1AP06126 327 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 CELP19835 753 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 QRFPP83859 136 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 EWSR1Q01844 656 aaKnown RBP eCLIP12.57□□□□□ -0.4
USE1-208ENST00000600970 C1orf100Q5SVJ3 147 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 FAM223AQ8IWN6 122 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 RPP25LQ8N5L8 163 aaKnown RBP12.57□□□□□ -0.4
USE1-208ENST00000600970 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.57□□□□□ -0.4
USE1-208ENST00000600970 RDH8Q9NYR8 311 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 TECRQ9NZ01 308 aaKnown RBP12.57□□□□□ -0.4
USE1-208ENST00000600970 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
USE1-208ENST00000600970 TRBV9A0A0B4J1U6 114 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 SHOXO15266 292 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 SOCS1O15524 211 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 MAPK3P27361 379 aaPredicted RBP12.56□□□□□ -0.4
USE1-208ENST00000600970 ZNF45Q02386 682 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 INSL4Q14641 139 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 TNXAQ16473 311 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 TMEM177Q53S58 311 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 CEMP1Q6PRD7 247 aaPredicted RBP12.56□□□□□ -0.4
USE1-208ENST00000600970 SLC16A13Q7RTY0 426 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 ZNF555Q8NEP9 628 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 THRSPQ92748 146 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 GGHQ92820 318 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
USE1-208ENST00000600970 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
USE1-208ENST00000600970 A0A0J9YWU9 116 aa12.55□□□□□ -0.4
USE1-208ENST00000600970 PPP5D1E7EU14 171 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms