RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TMEM69Q5SWH9 247 aa12.36□□□□□ -0.43
RPS28-203ENST00000600659 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
RPS28-203ENST00000600659 CMTM3Q96MX0 182 aa12.36□□□□□ -0.43
RPS28-203ENST00000600659 RNF5Q99942 180 aa12.36□□□□□ -0.43
RPS28-203ENST00000600659 TPSG1Q9NRR2 321 aa12.36□□□□□ -0.43
RPS28-203ENST00000600659 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
RPS28-203ENST00000600659 TSSC4Q9Y5U2 329 aaPredicted RBP12.36□□□□□ -0.43
RPS28-203ENST00000600659 A0A1W2PRX2 142 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 TCRBV4S1A1TA0A5B7 111 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 H7C2Y5 167 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 J3QRK9 145 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 FCN1O00602 326 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 ATP6V0E1O15342 81 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 HPGDSO60760 199 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 NAT1P18440 290 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 PPIFP30405 207 aaKnown RBP12.35□□□□□ -0.43
RPS28-203ENST00000600659 CRIP2P52943 208 aaPredicted RBP12.35□□□□□ -0.43
RPS28-203ENST00000600659 RPL30P62888 115 aaKnown RBP12.35□□□□□ -0.43
RPS28-203ENST00000600659 MRGPRG-AS1Q2M3A8 158 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 ZNF645Q8N7E2 425 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 ACOT12Q8WYK0 555 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 OR51J1Q9H342 316 aa12.35□□□□□ -0.43
RPS28-203ENST00000600659 SRRM4A7MD48 611 aaKnown RBP12.34□□□□□ -0.43
RPS28-203ENST00000600659 SPDEFO95238 335 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 IGHG4P01861 327 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 APOA2P02652 100 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 CRYGBP07316 175 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
RPS28-203ENST00000600659 CBX5P45973 191 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 THBS3P49746 956 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 LUMP51884 338 aaPredicted RBP12.34□□□□□ -0.43
RPS28-203ENST00000600659 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
RPS28-203ENST00000600659 TMEM177Q53S58 311 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 LCNL1Q6ZST4 164 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 CLVS1Q8IUQ0 354 aaPredicted RBP12.34□□□□□ -0.43
RPS28-203ENST00000600659 GPX8Q8TED1 209 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 R3HDM4Q96D70 268 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
RPS28-203ENST00000600659 RBMX2Q9Y388 322 aaKnown RBP12.34□□□□□ -0.43
RPS28-203ENST00000600659 G3V318 75 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 ZNF182P17025 639 aaPredicted RBP12.33□□□□□ -0.44
RPS28-203ENST00000600659 AADACP22760 399 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 RPL5P46777 297 aaKnown RBP12.33□□□□□ -0.44
RPS28-203ENST00000600659 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 CX3CL1P78423 397 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
RPS28-203ENST00000600659 LIN54Q6MZP7 749 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 BVESQ8NE79 360 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 OR5AP2Q8NGF4 316 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 MYOZ3Q8TDC0 251 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 MIXL1Q9H2W2 232 aa12.33□□□□□ -0.44
RPS28-203ENST00000600659 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
RPS28-203ENST00000600659 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
RPS28-203ENST00000600659 OR5H8P0DN80 308 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 PSMB8P28062 276 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 FCGR2CP31995 323 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 ARPC4P59998 168 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 SLC35B1P78383 322 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 FOXE3Q13461 319 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 OVCH2Q7RTZ1 564 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 OR4F17Q8NGA8 305 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 DYNC2LI1Q8TCX1 351 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
RPS28-203ENST00000600659 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
RPS28-203ENST00000600659 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
RPS28-203ENST00000600659 ARPC1BO15143 372 aaKnown RBP12.31□□□□□ -0.44
RPS28-203ENST00000600659 SLC25A17O43808 307 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 SOX15O60248 233 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 PPYP01298 95 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 IGLV1-40P01703 118 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 ELANEP08246 267 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 PRSS3P35030 304 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 TMBIM6P55061 237 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 RPS16P62249 146 aaKnown RBP12.31□□□□□ -0.44
RPS28-203ENST00000600659 TAGLNQ01995 201 aaKnown RBP12.31□□□□□ -0.44
RPS28-203ENST00000600659 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
RPS28-203ENST00000600659 CDK10Q15131 360 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 SAMD5Q5TGI4 173 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 TEX38Q6PEX7 206 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 MINDY2Q8NBR6 621 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 RAB2BQ8WUD1 216 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 GIMAP1Q8WWP7 306 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 ADTRPQ96IZ2 230 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 GPHA2Q96T91 129 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 TSNAXQ99598 290 aaKnown RBP12.31□□□□□ -0.44
RPS28-203ENST00000600659 BCL7BQ9BQE9 202 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 NECAP2Q9NVZ3 263 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 ADAM30Q9UKF2 790 aa12.31□□□□□ -0.44
RPS28-203ENST00000600659 H3BMQ9 156 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 CA2P00918 260 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 VDAC1P21796 283 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 PJVKQ0ZLH3 352 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 MSMO1Q15800 293 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms