RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 C8orf46Q8TAG6 207 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 CACNG5Q9UF02 275 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 PRELID3BQ9Y3B1 194 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 PKDREJQ9NTG1 2253 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 RBFOX2O43251 390 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■■□ 23.3
PNKP-214ENST00000600573 FCN3O75636 299 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 JTBO76095 146 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 RPL7L1Q6DKI1 246 aaKnown RBP16.48■□□□□ 0.23
PNKP-214ENST00000600573 EIF5AL1Q6IS14 154 aaKnown RBP16.48■□□□□ 0.23
PNKP-214ENST00000600573 SLC25A48Q6ZT89 311 aaKnown RBP16.48■□□□□ 0.23
PNKP-214ENST00000600573 FGFRL1Q8N441 504 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 OR2C3Q8N628 320 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 SLC25A31Q9H0C2 315 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 ARID1AO14497 2285 aa16.48■□□□□ 0.23
PNKP-214ENST00000600573 A0A087X0M5 115 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 BORCS7-ASMTA0A0B4J1R7 106 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 A0A1B0GX30 115 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 hCG_1809904A0A1W2PP81 198 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 A0A1W2PPE2 198 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 A0A1W2PR64 198 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 A0A1W2PRV1 198 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 DUTP33316 252 aaKnown RBP16.47■□□□□ 0.23
PNKP-214ENST00000600573 PRAMEF5Q5TYX0 476 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 SPAG16Q8N0X2 631 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 LINC00311Q8N616 119 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 S1PR3Q99500 378 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 MAGT1Q9H0U3 335 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 PATZ1Q9HBE1 687 aaKnown RBP16.47■□□□□ 0.23
PNKP-214ENST00000600573 LYRM2Q9NU23 88 aaPredicted RBP16.47■□□□□ 0.23
PNKP-214ENST00000600573 MMP24Q9Y5R2 645 aa16.47■□□□□ 0.23
PNKP-214ENST00000600573 C17orf98A8MV24 154 aa16.46■□□□□ 0.23
PNKP-214ENST00000600573 CDKN1AP38936 164 aa16.46■□□□□ 0.23
PNKP-214ENST00000600573 GPR6P46095 362 aaPredicted RBP16.46■□□□□ 0.23
PNKP-214ENST00000600573 ARHGDIBP52566 201 aa16.46■□□□□ 0.23
PNKP-214ENST00000600573 EWSR1Q01844 656 aaKnown RBP eCLIP16.46■□□□□ 0.23
PNKP-214ENST00000600573 AVPI1Q5T686 147 aa16.46■□□□□ 0.23
PNKP-214ENST00000600573 ZNF596Q8TC21 504 aa16.46■□□□□ 0.23
PNKP-214ENST00000600573 COA4Q9NYJ1 87 aa16.46■□□□□ 0.23
PNKP-214ENST00000600573 THBS3P49746 956 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 CAV2P51636 162 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 DLX6P56179 175 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 ZNF816Q0VGE8 651 aaPredicted RBP16.45■□□□□ 0.22
PNKP-214ENST00000600573 OR2B11Q5JQS5 317 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 WDR25Q64LD2 544 aaPredicted RBP16.45■□□□□ 0.22
PNKP-214ENST00000600573 TMED6Q8WW62 240 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 RAB40CQ96S21 281 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 SMIM3Q9BZL3 60 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 SPTBN1Q01082 2364 aaKnown RBP16.45■□□□□ 0.22
PNKP-214ENST00000600573 ABCA4P78363 2273 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 M0R1X1 148 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 RAMP3O60896 148 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 S1PR2O95136 353 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 CCL3L1P16619 93 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 TAGLNQ01995 201 aaKnown RBP16.45■□□□□ 0.22
PNKP-214ENST00000600573 AANATQ16613 207 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 FAM71F2Q6NXP2 309 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 UBAC2Q8NBM4 344 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 IGFBPL1Q8WX77 278 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 TNFRSF14Q92956 283 aa16.45■□□□□ 0.22
PNKP-214ENST00000600573 IGSF23A1L1A6 192 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 FAM90A26D6RGX4 464 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 MMP23AO75900 390 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 HPRT1P00492 218 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 BAXQ07812 192 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 LYG1Q8N1E2 194 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 SESN1Q9Y6P5 492 aa16.44■□□□□ 0.22
PNKP-214ENST00000600573 FAM24AA6NFZ4 105 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 LINC00473A8K010 186 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 FGF16O43320 207 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 PROP1O75360 226 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 NXPH3O95157 252 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 P0C879 139 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 RPL23AP62750 156 aaKnown RBP16.43■□□□□ 0.22
PNKP-214ENST00000600573 IZUMO4Q1ZYL8 232 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 Q6ZRM9 215 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 LY6G5BQ8NDX9 201 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 RNF141Q8WVD5 230 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 BSCL2Q96G97 398 aaPredicted RBP16.43■□□□□ 0.22
PNKP-214ENST00000600573 ARV1Q9H2C2 271 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 CACFD1Q9UGQ2 172 aa16.43■□□□□ 0.22
PNKP-214ENST00000600573 PPIAL4CA0A0B4J2A2 164 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 MFSD2BA6NFX1 497 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 KIAA1324LA8MWY0 1029 aaPredicted RBP16.42■□□□□ 0.22
PNKP-214ENST00000600573 SLC31A2O15432 143 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 CHST1O43916 411 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 LY6HO94772 140 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 LIPFP07098 398 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 PPIAL4GP0DN37 164 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 IGHV1-8P0DP01 117 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 GNB2P62879 340 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 ODF3L1Q8IXM7 274 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 TMEM252Q8N6L7 170 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 OR9G1Q8NH87 305 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 MARVELD3Q96A59 401 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 TMEM186Q96B77 213 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 REG4Q9BYZ8 158 aa16.42■□□□□ 0.22
PNKP-214ENST00000600573 SAA2-SAA4A0A096LPE2 208 aa16.41■□□□□ 0.22
PNKP-214ENST00000600573 FAM90A9PA6NNJ1 464 aa16.41■□□□□ 0.22
PNKP-214ENST00000600573 TOR1AO14656 332 aa16.41■□□□□ 0.22
PNKP-214ENST00000600573 RNF224P0DH78 156 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms