RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 EDN2P20800 178 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 CAPGP40121 348 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 CEACAM6P40199 344 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 KIR2DS2P43631 304 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 TMEM50BP56557 158 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 RPS16P62249 146 aaKnown RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 RPS27AP62979 156 aaKnown RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 UNC119Q13432 240 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 INSL4Q14641 139 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 CD300EQ496F6 205 aaPredicted RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 LRRTM1Q86UE6 522 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 GTSCR1Q86UQ5 136 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 LAX1Q8IWV1 398 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 FAM89BQ8N5H3 189 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 ADAD2Q8NCV1 583 aaKnown RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 BVESQ8NE79 360 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 GRPEL2Q8TAA5 225 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 IL1F10Q8WWZ1 152 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 C5orf30Q96GV9 206 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 USMG5Q96IX5 58 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 TMEM68Q96MH6 324 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 NICN1Q9BSH3 213 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 HDHD3Q9BSH5 251 aaPredicted RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 ZC4H2Q9NQZ6 224 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 ZNF355PQ9NSJ1 428 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 CKLFQ9UBR5 152 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 STEAP1Q9UHE8 339 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 EXOSC1Q9Y3B2 195 aaKnown RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 VPS13DQ5THJ4 4388 aa4.59□□□□□ -1.68
VRK3-220ENST00000600259 HECTD4Q9Y4D8 3996 aa4.59□□□□□ -1.68
VRK3-220ENST00000600259 MSGN1A6NI15 193 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 OR11H12B2RN74 326 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 SOCS1O15524 211 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 AIREO43918 545 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 ATP5HO75947 161 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 TPPPO94811 219 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 CPEP16870 476 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 AADACP22760 399 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 LGALS7P47929 136 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 RASSF2P50749 326 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 CD81P60033 236 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 ZNF45Q02386 682 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 TATDN3Q17R31 274 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 TMEM177Q53S58 311 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 LAIR2Q6ISS4 152 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 PDPNQ86YL7 162 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 LINC00528Q8N1L1 170 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 EDARADDQ8WWZ3 215 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 GGHQ92820 318 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 SNAPC3Q92966 411 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 NEDD4LQ96PU5 975 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 LPAR5Q9H1C0 372 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 KCNK15Q9H427 330 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 Q9N2K0 584 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 AKIP1Q9NQ31 210 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 ABRACLQ9P1F3 81 aa4.58□□□□□ -1.68
VRK3-220ENST00000600259 ZNF230Q9UIE0 474 aaPredicted RBP4.58□□□□□ -1.68
VRK3-220ENST00000600259 RYR1P21817 5038 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.57□□□□□ -1.68
VRK3-220ENST00000600259 C2orf70A6NJV1 201 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 CNIH1O95406 144 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 LY6G6CO95867 125 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 OR9G9P0C7N8 305 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 UBBP0CG47 229 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 FOLR2P14207 255 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 CELP19835 753 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 ZBTB25P24278 435 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 HLA-DRB3P79483 266 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 ST3GAL4Q11206 333 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 RPEL1Q2QD12 228 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 ZFP1Q6P2D0 407 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 MOB1BQ7L9L4 216 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 WFDC3Q8IUB2 231 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 RPP25LQ8N5L8 163 aaKnown RBP4.57□□□□□ -1.68
VRK3-220ENST00000600259 NKAIN3Q8N8D7 197 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.57□□□□□ -1.68
VRK3-220ENST00000600259 KCNG3Q8TAE7 436 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 DDB2Q92466 427 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 WDR89Q96FK6 387 aaPredicted RBP4.57□□□□□ -1.68
VRK3-220ENST00000600259 TMEM80Q96HE8 168 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 GFI1Q99684 422 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 C9orf16Q9BUW7 83 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 ST6GALNAC5Q9BVH7 336 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 RIMS4Q9H426 269 aaPredicted RBP4.57□□□□□ -1.68
VRK3-220ENST00000600259 SRD5A3Q9H8P0 318 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 SLC35D1Q9NTN3 355 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 SDHAF2Q9NX18 166 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 AK3Q9UIJ7 227 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
VRK3-220ENST00000600259 PNMA8CA0A1B0GUJ8 204 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 IRGMA1A4Y4 181 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 EFCAB10A6NFE3 127 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 M0R1X1 148 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 LGALS9O00182 355 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 CIB2O75838 187 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 PRH1P02810 166 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 CD3GP09693 182 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 APELAP0DMC3 54 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 MYL12AP19105 171 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 RHOGP84095 191 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms