RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 DNAH6Q9C0G6 4158 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 MFNGO00587 321 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 HSD17B6O14756 317 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 CA11O75493 328 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 MT-ND4P03905 459 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 GAPDHP04406 335 aaKnown RBP13.4□□□□□ -0.26
SSBP4-207ENST00000600244 LGALS1P09382 135 aaKnown RBP13.4□□□□□ -0.26
SSBP4-207ENST00000600244 F2RL1P55085 397 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 UBE2NLQ5JXB2 153 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 ARHGAP5-AS1Q96IT6 56 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 NEDD4LQ96PU5 975 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 FAAP24Q9BTP7 215 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 PECRQ9BY49 303 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 LINC00574Q9H8X3 128 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 FAT2Q9NYQ8 4349 aa13.4□□□□□ -0.26
SSBP4-207ENST00000600244 DNAH11Q96DT5 4516 aa13.4□□□□□ -0.27
SSBP4-207ENST00000600244 A0A075B6Q4 140 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 A0A0A6YYH2 397 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 A6NJ64 397 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 SCGNO76038 276 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 RGS11O94810 467 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 NAPSAO96009 420 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 MOSP00540 346 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 APOA1P02647 267 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 REG1BP48304 166 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 SAMD12Q8N8I0 201 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 MINDY2Q8NBR6 621 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 RAB3CQ96E17 227 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 RSRP1Q9BUV0 290 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 PLEKHJ1Q9NW61 149 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 COMMD3Q9UBI1 195 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 ZNF107Q9UII5 783 aaPredicted RBP13.39□□□□□ -0.27
SSBP4-207ENST00000600244 KIF25Q9UIL4 384 aa13.39□□□□□ -0.27
SSBP4-207ENST00000600244 TMEM30CPA0ZSE6 113 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 UBE2QL1A1L167 161 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 H0Y980 276 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 HSPB1P04792 205 aaKnown RBP13.38□□□□□ -0.27
SSBP4-207ENST00000600244 HIST1H1DP16402 221 aaKnown RBP13.38□□□□□ -0.27
SSBP4-207ENST00000600244 CD1BP29016 333 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 MZT2AQ6P582 158 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 GTSCR1Q86UQ5 136 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 FLYWCH2Q96CP2 140 aaKnown RBP13.38□□□□□ -0.27
SSBP4-207ENST00000600244 MIXL1Q9H2W2 232 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 ETAA1Q9NY74 926 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 IDI2-AS1Q9NZ38 188 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 OR6C3Q9NZP0 311 aa13.38□□□□□ -0.27
SSBP4-207ENST00000600244 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 ZNF736B4DX44 427 aaPredicted RBP13.37□□□□□ -0.27
SSBP4-207ENST00000600244 HPGDSO60760 199 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 EIF4EP06730 217 aaKnown RBP13.37□□□□□ -0.27
SSBP4-207ENST00000600244 GNG10P50151 68 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 ZNF880Q6PDB4 577 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 OR10X1Q8NGY0 326 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 MRPL30Q8TCC3 161 aaKnown RBP13.37□□□□□ -0.27
SSBP4-207ENST00000600244 NEK7Q8TDX7 302 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 DCUN1D5Q9BTE7 237 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 MBNL3Q9NUK0 354 aaKnown RBP13.37□□□□□ -0.27
SSBP4-207ENST00000600244 CALYQ9NYX4 217 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 AK3Q9UIJ7 227 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 A3GALT2U3KPV4 340 aa13.37□□□□□ -0.27
SSBP4-207ENST00000600244 DNAH2Q9P225 4427 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 MEIKINA0A087WXM9 373 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 TRAV41A0A0B4J266 112 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 A0A1B0GVY2 172 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 A0A1W2PPE3 182 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 NPIPB11E5RHQ5 1161 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 CTDSP2O14595 271 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 ARPC1BO15143 372 aaKnown RBP13.36□□□□□ -0.27
SSBP4-207ENST00000600244 ATP6V0E1O15342 81 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 XRCC3O43542 346 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 GSTP1P09211 210 aaKnown RBP13.36□□□□□ -0.27
SSBP4-207ENST00000600244 GNB3P16520 340 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 ELK1P19419 428 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 ARL6IP1Q15041 203 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 OR13A1Q8NGR1 328 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 S100A16Q96FQ6 103 aaKnown RBP13.36□□□□□ -0.27
SSBP4-207ENST00000600244 ING3Q9NXR8 418 aa13.36□□□□□ -0.27
SSBP4-207ENST00000600244 KLK5Q9Y337 293 aaPredicted RBP13.36□□□□□ -0.27
SSBP4-207ENST00000600244 HERC1Q15751 4861 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 DNAH17Q9UFH2 4485 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 SOX15O60248 233 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.27
SSBP4-207ENST00000600244 CDNFQ49AH0 187 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
SSBP4-207ENST00000600244 PLEKHA3Q9HB20 300 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 DIABLOQ9NR28 239 aa13.35□□□□□ -0.27
SSBP4-207ENST00000600244 ELF5Q9UKW6 265 aaPredicted RBP13.35□□□□□ -0.27
SSBP4-207ENST00000600244 TRAV18A0A075B6X5 111 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 TRAV39A0A0B4J263 110 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 C15orf65H3BRN8 121 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 CNIH1O95406 144 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 HACD4Q5VWC8 232 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 ZNF554Q86TJ5 538 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 ZNF565Q8N9K5 539 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 OR4K15Q8NH41 348 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms