RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 C8orf31Q8N9H6 132 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 GRPEL2Q8TAA5 225 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 IL22RA2Q969J5 263 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 TMEM186Q96B77 213 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 C5orf30Q96GV9 206 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 ABHD14BQ96IU4 210 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 OR10C1Q96KK4 312 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 HIF1ANQ9NWT6 349 aa17.04■□□□□ 0.32
COPE-208ENST00000598969 TRAV20A0A0B4J274 112 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 HMSDA8MTL9 139 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 J3QR06 171 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 TOX4O94842 621 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 COX7A1P24310 79 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 PSMB6P28072 239 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 CATR1Q13166 79 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 KLRD1Q13241 179 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 IAH1Q2TAA2 248 aaPredicted RBP17.03■□□□□ 0.32
COPE-208ENST00000598969 LRRC37A5PQ49AS3 106 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 LYZL2Q7Z4W2 148 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 C9orf62Q8N4C0 152 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 LINC00311Q8N616 119 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 OR9G1Q8NH87 305 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 RBPMSQ93062 196 aaKnown RBP17.03■□□□□ 0.32
COPE-208ENST00000598969 PCGF1Q9BSM1 259 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 ITPR3Q14573 2671 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 NOTCH2Q04721 2471 aa17.03■□□□□ 0.32
COPE-208ENST00000598969 FXYD6-FXYD2A0A087WZ82 144 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 MPTX1A8MV57 137 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 GPR12P47775 334 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 ODF3L1Q8IXM7 274 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 PNKDQ8N490 385 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 SLC35G3Q8N808 338 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 THAP6Q8TBB0 222 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 CLEC7AQ9BXN2 247 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 GSKIPQ9P0R6 139 aa17.02■□□□□ 0.32
COPE-208ENST00000598969 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.02■□□□□ 0.324e-7■■■□□ 14.8
COPE-208ENST00000598969 PROP1O75360 226 aa17.02■□□□□ 0.31
COPE-208ENST00000598969 ZNF16P17020 682 aaPredicted RBP17.02■□□□□ 0.31
COPE-208ENST00000598969 HOXB4P17483 251 aaPredicted RBP17.02■□□□□ 0.31
COPE-208ENST00000598969 C11orf87Q6NUJ2 197 aa17.02■□□□□ 0.31
COPE-208ENST00000598969 ZNF66Q6ZN08 573 aa17.02■□□□□ 0.31
COPE-208ENST00000598969 C1orf229Q6ZS94 237 aaPredicted RBP17.02■□□□□ 0.31
COPE-208ENST00000598969 SELENOHQ8IZQ5 122 aaKnown RBP17.02■□□□□ 0.31
COPE-208ENST00000598969 LHFPL5Q8TAF8 219 aa17.02■□□□□ 0.31
COPE-208ENST00000598969 HSD17B10Q99714 261 aaKnown RBP17.02■□□□□ 0.31
COPE-208ENST00000598969 FLNBO75369 2602 aaKnown RBP17.02■□□□□ 0.31
COPE-208ENST00000598969 RNASEK-C17orf49H0YIS7 233 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 IGLV1-47P01700 117 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 PET100P0DJ07 73 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 C4BPBP20851 252 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 LAMTOR1Q6IAA8 161 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 OR13D1Q8NGV5 346 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 HEXA-AS1Q9H8Q6 139 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 PLSCR3Q9NRY6 295 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 SDHAF2Q9NX18 166 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 BOLA1Q9Y3E2 137 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 CREBBPQ92793 2442 aa17.01■□□□□ 0.31
COPE-208ENST00000598969 TRAV14DV4A0A0A6YYC5 116 aa17■□□□□ 0.31
COPE-208ENST00000598969 MPC2O95563 127 aa17■□□□□ 0.31
COPE-208ENST00000598969 TGFAP01135 160 aa17■□□□□ 0.31
COPE-208ENST00000598969 SLC25A4P12235 298 aa17■□□□□ 0.31
COPE-208ENST00000598969 TCTEX1D1Q8N7M0 179 aa17■□□□□ 0.31
COPE-208ENST00000598969 OR11H6Q8NGC7 330 aa17■□□□□ 0.31
COPE-208ENST00000598969 SPIN2AQ99865 258 aa17■□□□□ 0.31
COPE-208ENST00000598969 SPIN2BQ9BPZ2 258 aa17■□□□□ 0.31
COPE-208ENST00000598969 ZNF469Q96JG9 3925 aaPredicted RBP17■□□□□ 0.31
COPE-208ENST00000598969 SMAD7O15105 426 aaKnown RBP17■□□□□ 0.31
COPE-208ENST00000598969 RPA2P15927 270 aa17■□□□□ 0.31
COPE-208ENST00000598969 VDAC1P21796 283 aa17■□□□□ 0.31
COPE-208ENST00000598969 GATA3P23771 443 aa17■□□□□ 0.31
COPE-208ENST00000598969 ZNF546Q86UE3 836 aa17■□□□□ 0.31
COPE-208ENST00000598969 LYG1Q8N1E2 194 aa17■□□□□ 0.31
COPE-208ENST00000598969 BEND2Q8NDZ0 799 aa17■□□□□ 0.31
COPE-208ENST00000598969 ZNF251Q9BRH9 671 aa17■□□□□ 0.31
COPE-208ENST00000598969 GAB2Q9UQC2 676 aa17■□□□□ 0.31
COPE-208ENST00000598969 TOR1AO14656 332 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 ARPC5O15511 151 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 EIF4EBP1Q13541 118 aaPredicted RBP16.99■□□□□ 0.31
COPE-208ENST00000598969 HLA-DRB5Q30154 266 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 LGALSLQ3ZCW2 172 aaPredicted RBP16.99■□□□□ 0.31
COPE-208ENST00000598969 RPL39P5Q59GN2 51 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 TMEM65Q6PI78 240 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 PDZD9Q8IXQ8 264 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.99■□□□□ 0.31
COPE-208ENST00000598969 OR4P4Q8NGL7 312 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 FAM212BQ9NTI7 297 aaPredicted RBP16.99■□□□□ 0.31
COPE-208ENST00000598969 AUP1Q9Y679 476 aa16.99■□□□□ 0.31
COPE-208ENST00000598969 SAA2-SAA4A0A096LPE2 208 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 ODF3BA8MYP8 253 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 L7N2F9 121 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 RAB29O14966 203 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 SAA2P0DJI9 122 aaPredicted RBP16.98■□□□□ 0.31
COPE-208ENST00000598969 PRRX1P54821 245 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 NCR3LG1Q68D85 454 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 CYB5R2Q6BCY4 276 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 ZBTB8BQ8NAP8 495 aaPredicted RBP16.98■□□□□ 0.31
COPE-208ENST00000598969 TCTEX1D2Q8WW35 142 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 C7orf69Q9H7B7 122 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 ZFP57Q9NU63 452 aa16.98■□□□□ 0.31
COPE-208ENST00000598969 MYO9AB2RTY4 2548 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms