RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 AP3S1Q92572 193 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 NOL4LQ96MY1 436 aaPredicted RBP13.87□□□□□ -0.19
USHBP1-209ENST00000598570 SCPEP1Q9HB40 452 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 IGKV1D-13A0A0B4J2D9 117 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 PSMB11A5LHX3 300 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 SULT1C2O00338 296 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 HPGDSO60760 199 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 PEX14O75381 377 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 IGLV2-23P01705 113 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 CSF1P09603 554 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 IGKV1-13P0DP09 117 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 NFYAP23511 347 aaPredicted RBP13.86□□□□□ -0.19
USHBP1-209ENST00000598570 PPIFP30405 207 aaKnown RBP13.86□□□□□ -0.19
USHBP1-209ENST00000598570 LGALS7P47929 136 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 THBS3P49746 956 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 LUMP51884 338 aaPredicted RBP13.86□□□□□ -0.19
USHBP1-209ENST00000598570 PSG5Q15238 335 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 LIN54Q6MZP7 749 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 MZT2AQ6P582 158 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 GON7Q9BXV9 100 aa13.86□□□□□ -0.19
USHBP1-209ENST00000598570 TNCP24821 2201 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 LINC00473A8K010 186 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 IGHG4P01861 327 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 OPN1MWP04001 364 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 OPN1MW2P0DN77 364 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 OPN1MW3P0DN78 364 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 RRASP10301 218 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 EGR2P11161 476 aaPredicted RBP13.85□□□□□ -0.19
USHBP1-209ENST00000598570 PRSS3P35030 304 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 ARSJQ5FYB0 599 aaPredicted RBP13.85□□□□□ -0.19
USHBP1-209ENST00000598570 C9orf152Q5JTZ5 239 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 CLVS1Q8IUQ0 354 aaPredicted RBP13.85□□□□□ -0.19
USHBP1-209ENST00000598570 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 WFDC9Q8NEX5 89 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 MYOZ3Q8TDC0 251 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 OR51J1Q9H342 316 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 ZFP57Q9NU63 452 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 NECAP2Q9NVZ3 263 aa13.85□□□□□ -0.19
USHBP1-209ENST00000598570 RBMX2Q9Y388 322 aaKnown RBP13.85□□□□□ -0.19
USHBP1-209ENST00000598570 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
USHBP1-209ENST00000598570 NOTCH3Q9UM47 2321 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 SMIM31A0A1B0GVY4 71 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 FCN1O00602 326 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 OR5H8P0DN80 308 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 SLC6A1P30531 599 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 BRWD1-AS2P59051 145 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 FOXE3Q13461 319 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 DYRK1AQ13627 763 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 MRGPRG-AS1Q2M3A8 158 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 ZNF562Q6V9R5 426 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 MINDY2Q8NBR6 621 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 FLYWCH2Q96CP2 140 aaKnown RBP13.84□□□□□ -0.19
USHBP1-209ENST00000598570 TSNAXQ99598 290 aaKnown RBP13.84□□□□□ -0.19
USHBP1-209ENST00000598570 MIXL1Q9H2W2 232 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 CCDC59Q9P031 241 aaKnown RBP13.84□□□□□ -0.19
USHBP1-209ENST00000598570 NUBP2Q9Y5Y2 271 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 CEPT1Q9Y6K0 416 aa13.84□□□□□ -0.19
USHBP1-209ENST00000598570 SRRM4A7MD48 611 aaKnown RBP13.83□□□□□ -0.2
USHBP1-209ENST00000598570 IGLV1-40P01703 118 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 APOA2P02652 100 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 FCGR2CP31995 323 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 CX3CL1P78423 397 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 CDK10Q15131 360 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 HIST2H2BDQ6DRA6 164 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 TEX38Q6PEX7 206 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 ZNF329Q86UD4 541 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 ZBTB34Q8NCN2 500 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 OR4X2Q8NGF9 303 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 HSD17B10Q99714 261 aaKnown RBP13.83□□□□□ -0.2
USHBP1-209ENST00000598570 NXF2Q9GZY0 626 aaKnown RBP13.83□□□□□ -0.2
USHBP1-209ENST00000598570 SLC35D1Q9NTN3 355 aa13.83□□□□□ -0.2
USHBP1-209ENST00000598570 H3BMQ9 156 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 H7C2Y5 167 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 PPYP01298 95 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 ELANEP08246 267 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 AADACP22760 399 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 PSMB8P28062 276 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 SLC35B1P78383 322 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 SSBP2P81877 361 aaPredicted RBP13.82□□□□□ -0.2
USHBP1-209ENST00000598570 KIAA0141Q14154 515 aaPredicted RBP13.82□□□□□ -0.2
USHBP1-209ENST00000598570 OR4F17Q8NGA8 305 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 ISOC1Q96CN7 298 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 OR4F4Q96R69 305 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 SLIRPQ9GZT3 109 aaKnown RBP13.82□□□□□ -0.2
USHBP1-209ENST00000598570 RBM38Q9H0Z9 239 aaKnown RBP13.82□□□□□ -0.2
USHBP1-209ENST00000598570 FBXL15Q9H469 300 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 KIAA1456Q9P272 454 aa13.82□□□□□ -0.2
USHBP1-209ENST00000598570 TCRBV4S1A1TA0A5B7 111 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 TAS2R46P59540 309 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 ARPC4P59998 168 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 RPL30P62888 115 aaKnown RBP13.81□□□□□ -0.2
USHBP1-209ENST00000598570 NDPQ00604 133 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 ZNF66Q6ZN08 573 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 BVESQ8NE79 360 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 OSR1Q8TAX0 266 aaPredicted RBP13.81□□□□□ -0.2
USHBP1-209ENST00000598570 C15orf40Q8WUR7 153 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 ABHD1Q96SE0 405 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 SOSTQ9BQB4 213 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 SCOCQ9UIL1 159 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms