RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 GALP22466 123 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 ZBTB25P24278 435 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 CHRNA7P36544 502 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 CEACAM6P40199 344 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 TMEM267Q0VDI3 215 aaPredicted RBP9.64□□□□□ -0.87
TRIM28-212ENST00000597995 PYHIN1Q6K0P9 492 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 FAM131AQ6UXB0 335 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 ARPC1AQ92747 370 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 FLYWCH2Q96CP2 140 aaKnown RBP9.64□□□□□ -0.87
TRIM28-212ENST00000597995 OR4C12Q96R67 309 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 TXNL4BQ9NX01 149 aaKnown RBP9.64□□□□□ -0.87
TRIM28-212ENST00000597995 RNF150Q9ULK6 438 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 NUBP2Q9Y5Y2 271 aa9.64□□□□□ -0.87
TRIM28-212ENST00000597995 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 A0A087WW49 117 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 H0YJW9 148 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 MFNGO00587 321 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 GNB3P16520 340 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 RAB6AP20340 208 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 PSMB9P28065 219 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 FGF9P31371 208 aaPredicted RBP9.63□□□□□ -0.87
TRIM28-212ENST00000597995 CX3CL1P78423 397 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 PITPNAQ00169 270 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 NDPQ00604 133 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 ECSCRQ19T08 205 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 OR5AN1Q8NGI8 311 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 OR10R2Q8NGX6 335 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 RAB3CQ96E17 227 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 YTHDF1Q9BYJ9 559 aaKnown RBP9.63□□□□□ -0.87
TRIM28-212ENST00000597995 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
TRIM28-212ENST00000597995 MGAT4AQ9UM21 535 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 FBXO7Q9Y3I1 522 aa9.63□□□□□ -0.87
TRIM28-212ENST00000597995 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 FCN1O00602 326 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 RRHO14718 337 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 HSPA12AO43301 675 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 FCGR3AP08637 254 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 GSTT2P0CG29 244 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 GSTT2BP0CG30 244 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 IGHV4-30-4P0DP06 118 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 EGR2P11161 476 aaPredicted RBP9.62□□□□□ -0.87
TRIM28-212ENST00000597995 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
TRIM28-212ENST00000597995 MYL9P24844 172 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 AKIRIN2Q53H80 203 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 Q8N1Y9 231 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 ZNF383Q8NA42 475 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 DRAXINQ8NBI3 349 aaPredicted RBP9.62□□□□□ -0.87
TRIM28-212ENST00000597995 EDARADDQ8WWZ3 215 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 MAFIPQ8WZ33 124 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 ISOC1Q96CN7 298 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 C5orf30Q96GV9 206 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 ELOVL1Q9BW60 279 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 OR51E2Q9H255 320 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 FBXL15Q9H469 300 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 EDA2RQ9HAV5 297 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 RDH8Q9NYR8 311 aa9.62□□□□□ -0.87
TRIM28-212ENST00000597995 ZNF230Q9UIE0 474 aaPredicted RBP9.62□□□□□ -0.87
TRIM28-212ENST00000597995 A0A075B6Q4 140 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 OR5H14A6NHG9 310 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 FABP7O15540 132 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 IGKV1-16P04430 117 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 CD40LGP29965 261 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 MC5RP33032 325 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 SRSF7Q16629 238 aaKnown RBP eCLIP9.61□□□□□ -0.879e-7■□□□□ 10.6
TRIM28-212ENST00000597995 ZNF773Q6PK81 442 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 OR4A4PQ8NGN8 299 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 RHOVQ96L33 236 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 RNF5Q99942 180 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 CABLES2Q9BTV7 478 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 Q9H521 79 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 SLA2Q9H6Q3 261 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 RNF167Q9H6Y7 350 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 GAR1Q9NY12 217 aaKnown RBP9.61□□□□□ -0.87
TRIM28-212ENST00000597995 STUB1Q9UNE7 303 aa9.61□□□□□ -0.87
TRIM28-212ENST00000597995 DNAH1Q9P2D7 4330 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 TRBV6-7A0A0A0MS04 114 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 NOTOA8MTQ0 251 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 RBBP9O75884 186 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 IGLV1-51P01701 117 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 CLEC2LP0C7M8 214 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 PLGLAQ15195 96 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 ACTBL2Q562R1 376 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 ZFAND6Q6FIF0 208 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 UNQ5815/PRO19632Q6UWF5 114 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 ZNF562Q6V9R5 426 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 PPP1R27Q86WC6 154 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 SGPP2Q8IWX5 399 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 CASTOR1Q8WTX7 329 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 GAB2Q9UQC2 676 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 WASHC3Q9Y3C0 194 aa9.6□□□□□ -0.87
TRIM28-212ENST00000597995 BET1O15155 118 aa9.59□□□□□ -0.87
TRIM28-212ENST00000597995 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
TRIM28-212ENST00000597995 TFAP2AP05549 437 aa9.59□□□□□ -0.87
TRIM28-212ENST00000597995 GSTP1P09211 210 aaKnown RBP9.59□□□□□ -0.87
TRIM28-212ENST00000597995 PSG5Q15238 335 aa9.59□□□□□ -0.87
TRIM28-212ENST00000597995 ANKRD13BQ86YJ7 626 aa9.59□□□□□ -0.87
TRIM28-212ENST00000597995 ABHD5Q8WTS1 349 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms