RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 I3L521 148 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 M0R1X1 148 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 SOX15O60248 233 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 DIRAS3O95661 229 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 CRIP2P52943 208 aaPredicted RBP11.72□□□□□ -0.53
LIG1-215ENST00000597901 RUNX1Q01196 453 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 PPP1R27Q86WC6 154 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 OR5B12Q96R08 314 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 OR51E2Q9H255 320 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 SDHAF2Q9NX18 166 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 A3GALT2U3KPV4 340 aa11.72□□□□□ -0.53
LIG1-215ENST00000597901 IGKV1D-8A0A087WSZ0 117 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 A0A1W2PN81 502 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 APOA2P02652 100 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 CHRNA7P36544 502 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 DGCR2P98153 550 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 FHL3Q13643 280 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 ARL6IP1Q15041 203 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 AKIRIN2Q53H80 203 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 Q6ZS49 121 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 PDPNQ86YL7 162 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 CENPOQ9BU64 300 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 SLC35D1Q9NTN3 355 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 DAPK2Q9UIK4 370 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 SCOCQ9UIL1 159 aa11.71□□□□□ -0.53
LIG1-215ENST00000597901 FOXA2Q9Y261 457 aaPredicted RBP11.71□□□□□ -0.53
LIG1-215ENST00000597901 RRP15Q9Y3B9 282 aaKnown RBP11.71□□□□□ -0.53
LIG1-215ENST00000597901 LGALS7P47929 136 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 GNB1P62873 340 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
LIG1-215ENST00000597901 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 LFNGQ8NES3 379 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 CASTOR1Q8WTX7 329 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 FAM103A1Q9BTL3 118 aaKnown RBP11.7□□□□□ -0.54
LIG1-215ENST00000597901 ST6GALNAC5Q9BVH7 336 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 OR2D2Q9H210 308 aa11.7□□□□□ -0.54
LIG1-215ENST00000597901 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.54
LIG1-215ENST00000597901 RBM7Q9Y580 266 aaKnown RBP11.7□□□□□ -0.54
LIG1-215ENST00000597901 SEC14L6B5MCN3 397 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 SLC25A17O43808 307 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 RAMP3O60896 148 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 SPDEFO95238 335 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 CA2P00918 260 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 IGLV2-23P01705 113 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 DTYMKP23919 212 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 SDC2P34741 201 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 LUMP51884 338 aaPredicted RBP11.69□□□□□ -0.54
LIG1-215ENST00000597901 TAGLNQ01995 201 aaKnown RBP11.69□□□□□ -0.54
LIG1-215ENST00000597901 ZNF616Q08AN1 781 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 FXYD3Q14802 87 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 ACTBL2Q562R1 376 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 ASPHD1Q5U4P2 390 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 HACD4Q5VWC8 232 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 H1FOOQ8IZA3 346 aaPredicted RBP11.69□□□□□ -0.54
LIG1-215ENST00000597901 BVESQ8NE79 360 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 C5orf30Q96GV9 206 aa11.69□□□□□ -0.54
LIG1-215ENST00000597901 ARPC1BO15143 372 aaKnown RBP11.68□□□□□ -0.54
LIG1-215ENST00000597901 CRYGBP07316 175 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 CLEC2LP0C7M8 214 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 OR8U8P0C7N1 319 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 MXD1Q05195 221 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 ZNF260Q3ZCT1 412 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 SFXN4Q6P4A7 337 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 MS4A10Q96PG2 267 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 ALX4Q9H161 411 aaPredicted RBP11.68□□□□□ -0.54
LIG1-215ENST00000597901 DCSTAMPQ9H295 470 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 RNF167Q9H6Y7 350 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 TPSG1Q9NRR2 321 aa11.68□□□□□ -0.54
LIG1-215ENST00000597901 SRRM4A7MD48 611 aaKnown RBP11.67□□□□□ -0.54
LIG1-215ENST00000597901 J3QRK9 145 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 CTXN2P0C2S0 81 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 CD40LGP29965 261 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 PITPNAQ00169 270 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 CD69Q07108 199 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 PJVKQ0ZLH3 352 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 TMEM177Q53S58 311 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 PYHIN1Q6K0P9 492 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 ARPC1AQ92747 370 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 RHOVQ96L33 236 aa11.67□□□□□ -0.54
LIG1-215ENST00000597901 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 SHOXO15266 292 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 SCGNO76038 276 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 CNIH1O95406 144 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 RRASP10301 218 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 CD36P16671 472 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
LIG1-215ENST00000597901 ECI1P42126 302 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
LIG1-215ENST00000597901 NEDD8Q15843 81 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 OR5T1Q8NG75 326 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 OR5H6Q8NGV6 325 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 LGALS14Q8TCE9 139 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms