RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 ZNF645Q8N7E2 425 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 RNF152Q8N8N0 203 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 DDB2Q92466 427 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 AP3S1Q92572 193 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 SNAPC3Q92966 411 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 FLYWCH2Q96CP2 140 aaKnown RBP12.89□□□□□ -0.35
CHERP-206ENST00000597261 ADTRPQ96IZ2 230 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 OR51J1Q9H342 316 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 KIAA1456Q9P272 454 aa12.89□□□□□ -0.35
CHERP-206ENST00000597261 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 HPGDSO60760 199 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 PRSS3P35030 304 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 LGALS7P47929 136 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 THBS3P49746 956 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 RPS16P62249 146 aaKnown RBP12.88□□□□□ -0.35
CHERP-206ENST00000597261 PSG5Q15238 335 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 ZNF660Q6AZW8 331 aaPredicted RBP12.88□□□□□ -0.35
CHERP-206ENST00000597261 TEX38Q6PEX7 206 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 DHRS11Q6UWP2 260 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 OR4F17Q8NGA8 305 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 OR5AP2Q8NGF4 316 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 OR4F4Q96R69 305 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 TSNAXQ99598 290 aaKnown RBP12.88□□□□□ -0.35
CHERP-206ENST00000597261 BCL7BQ9BQE9 202 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 FBXL15Q9H469 300 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
CHERP-206ENST00000597261 TET2Q6N021 2002 aaPredicted RBP12.88□□□□□ -0.35
CHERP-206ENST00000597261 SRRM4A7MD48 611 aaKnown RBP12.87□□□□□ -0.35
CHERP-206ENST00000597261 J3QRK9 145 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 APOA2P02652 100 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 CRYGBP07316 175 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 OR5H8P0DN80 308 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 RRASP10301 218 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 EGR2P11161 476 aaPredicted RBP12.87□□□□□ -0.35
CHERP-206ENST00000597261 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
CHERP-206ENST00000597261 FCGR2CP31995 323 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 ARPC4P59998 168 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 CX3CL1P78423 397 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 EIF4EBP1Q13541 118 aaPredicted RBP12.87□□□□□ -0.35
CHERP-206ENST00000597261 SPCS2Q15005 226 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 TMEM177Q53S58 311 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
CHERP-206ENST00000597261 LYSMD2Q8IV50 215 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 GPX8Q8TED1 209 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 RAB2BQ8WUD1 216 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 R3HDM4Q96D70 268 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 NECAP2Q9NVZ3 263 aa12.87□□□□□ -0.35
CHERP-206ENST00000597261 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
CHERP-206ENST00000597261 NOTCH1P46531 2555 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 MEIS3P1A6NDR6 274 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 LINC00473A8K010 186 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 TPPPO94811 219 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 SPDEFO95238 335 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 IGHG4P01861 327 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 AADACP22760 399 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 FOXE3Q13461 319 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 MSMO1Q15800 293 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 ZNF562Q6V9R5 426 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 BVESQ8NE79 360 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 SCPEP1Q9HB40 452 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 MRPS7Q9Y2R9 242 aaKnown RBP12.86□□□□□ -0.35
CHERP-206ENST00000597261 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
CHERP-206ENST00000597261 FCER2P06734 321 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 ELANEP08246 267 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 VDAC1P21796 283 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 CRIP2P52943 208 aaPredicted RBP12.85□□□□□ -0.35
CHERP-206ENST00000597261 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
CHERP-206ENST00000597261 CDK10Q15131 360 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 RTL8BQ17RB0 113 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 MINDY2Q8NBR6 621 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 METTL1Q9UBP6 276 aaKnown RBP12.85□□□□□ -0.35
CHERP-206ENST00000597261 ADAM30Q9UKF2 790 aa12.85□□□□□ -0.35
CHERP-206ENST00000597261 A0A1W2PRX2 142 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 G3V318 75 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 SULT1C2O00338 296 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 PPYP01298 95 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 PSMB8P28062 276 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 RFX2P48378 723 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 RPL30P62888 115 aaKnown RBP12.84□□□□□ -0.35
CHERP-206ENST00000597261 NDPQ00604 133 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 DYRK1AQ13627 763 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
CHERP-206ENST00000597261 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 ZBTB34Q8NCN2 500 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 DYNC2LI1Q8TCX1 351 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
CHERP-206ENST00000597261 IFT46Q9NQC8 304 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 WSB1Q9Y6I7 421 aa12.84□□□□□ -0.35
CHERP-206ENST00000597261 ATP6V0E1O15342 81 aa12.83□□□□□ -0.36
CHERP-206ENST00000597261 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
CHERP-206ENST00000597261 SLC6A1P30531 599 aa12.83□□□□□ -0.36
CHERP-206ENST00000597261 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.36
CHERP-206ENST00000597261 PLGLAQ15195 96 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms