RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 PDPNQ86YL7 162 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 Q8N6K4 173 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 ZNF383Q8NA42 475 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 OR4D10Q8NGI6 311 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 OR4C16Q8NGL9 310 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 HSD17B10Q99714 261 aaKnown RBP11.48□□□□□ -0.57
VRK3-213ENST00000597215 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 RANBP3Q9H6Z4 567 aaPredicted RBP11.48□□□□□ -0.57
VRK3-213ENST00000597215 AKIP1Q9NQ31 210 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 CCL28Q9NRJ3 127 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 C1RLQ9NZP8 487 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 MOB4Q9Y3A3 225 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 RNF212BA8MTL3 300 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 DISC1C4P0D8 188 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 M0QZK8 103 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 NDUFA7O95182 113 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 HKR1P10072 659 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 DUTP33316 252 aaKnown RBP11.47□□□□□ -0.57
VRK3-213ENST00000597215 FAUP35544 74 aaKnown RBP11.47□□□□□ -0.57
VRK3-213ENST00000597215 CBX3Q13185 183 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 TRIQKQ629K1 86 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 LPCAT3Q6P1A2 487 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 MFSD4AQ8N468 514 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 TOMM5Q8N4H5 51 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 OR8H1Q8NGG4 311 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 OR4C13Q8NGP0 309 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 C19orf24Q9BVV8 132 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 SLC35D1Q9NTN3 355 aa11.47□□□□□ -0.57
VRK3-213ENST00000597215 FGF16O43320 207 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 RRASP10301 218 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 INPP1P49441 399 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 RAG2P55895 527 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 UCP3P55916 312 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 LINC00205P59089 165 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 KLF9Q13886 244 aaPredicted RBP11.46□□□□□ -0.57
VRK3-213ENST00000597215 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 SCGB2B2Q4G0G5 96 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 FAAP20Q6NZ36 180 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 ZNF66Q6ZN08 573 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 ZNF818PQ6ZRF7 136 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 KCTD9Q7L273 389 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 LHFPL1Q86WI0 220 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 BVESQ8NE79 360 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 DEDD2Q8WXF8 326 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 DDB2Q92466 427 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
VRK3-213ENST00000597215 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
VRK3-213ENST00000597215 LINC00473A8K010 186 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 GPR31O00270 319 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 TSPAN9O75954 239 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 ZNF735P0CB33 412 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 PGAM2P15259 253 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 S100GP29377 79 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 GNRHRP30968 328 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 ECI1P42126 302 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 RELBQ01201 579 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 CATR1Q13166 79 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
VRK3-213ENST00000597215 MMDQ15546 238 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 AADACL3Q5VUY0 350 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 ZNF57Q68EA5 555 aaPredicted RBP11.45□□□□□ -0.58
VRK3-213ENST00000597215 Q6ZSV7 163 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 CMTM1Q8IZ96 169 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 SLC38A6Q8IZM9 456 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 OR4F5Q8NH21 305 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 TERB2Q8NHR7 220 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 TCTEX1D2Q8WW35 142 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 SDHCQ99643 169 aaPredicted RBP11.45□□□□□ -0.58
VRK3-213ENST00000597215 RNF5Q99942 180 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 PRRT1Q99946 306 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
VRK3-213ENST00000597215 TMEM89A2RUT3 159 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 TNFSF12O43508 249 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 PPP5CP53041 499 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 RPL30P62888 115 aaKnown RBP11.44□□□□□ -0.58
VRK3-213ENST00000597215 FOXL1Q12952 345 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 BAK1Q16611 211 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 C11orf88Q6PI97 169 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 TAF15Q92804 592 aaKnown RBP eCLIP11.44□□□□□ -0.58
VRK3-213ENST00000597215 FLYWCH2Q96CP2 140 aaKnown RBP11.44□□□□□ -0.58
VRK3-213ENST00000597215 RBMXL1Q96E39 390 aaKnown RBP11.44□□□□□ -0.58
VRK3-213ENST00000597215 RSRP1Q9BUV0 290 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 WDR12Q9GZL7 423 aaKnown RBP11.44□□□□□ -0.58
VRK3-213ENST00000597215 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 PLSCR3Q9NRY6 295 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 MCUBQ9NWR8 336 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 SLC2A8Q9NY64 477 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 KIAA1456Q9P272 454 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 SCP2D1Q9UJQ7 156 aa11.44□□□□□ -0.58
VRK3-213ENST00000597215 FBN1P35555 2871 aaKnown RBP11.44□□□□□ -0.58
VRK3-213ENST00000597215 NBR2O15453 112 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 FCGR3BO75015 233 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 AMY1AP04745 511 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 KIR2DS2P43631 304 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 F2RL1P55085 397 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 RPS16P62249 146 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms