RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SOX15O60248 233 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 OR8U9P0C7N5 309 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 GNB1P62873 340 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 ARFRP1Q13795 201 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 NR2C2APQ86WQ0 139 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 MAFIPQ8WZ33 124 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 FLYWCH2Q96CP2 140 aaKnown RBP18.23■□□□□ 0.51
LSM4-204ENST00000594828 CABLES2Q9BTV7 478 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 Q9H521 79 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 SCOCQ9UIL1 159 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 GAB2Q9UQC2 676 aa18.23■□□□□ 0.51
LSM4-204ENST00000594828 SPDEFO95238 335 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 DIRAS3O95661 229 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 PSMB9P28065 219 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 TALDO1P37837 337 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 CD69Q07108 199 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 ZNF260Q3ZCT1 412 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 AKIRIN2Q53H80 203 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 UNQ5815/PRO19632Q6UWF5 114 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 CASTOR1Q8WTX7 329 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 FAM103A1Q9BTL3 118 aaKnown RBP18.22■□□□□ 0.51
LSM4-204ENST00000594828 ATG5Q9H1Y0 275 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 OR2D2Q9H210 308 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 SLC35D1Q9NTN3 355 aa18.22■□□□□ 0.51
LSM4-204ENST00000594828 SMIM30A4D0T7 59 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 CA2P00918 260 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 SNRPBP14678 240 aaKnown RBP18.21■□□□□ 0.51
LSM4-204ENST00000594828 FGF9P31371 208 aaPredicted RBP18.21■□□□□ 0.51
LSM4-204ENST00000594828 ECI1P42126 302 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 ACTBL2Q562R1 376 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 VAX1Q5SQQ9 334 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 ASPHD1Q5U4P2 390 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 PYHIN1Q6K0P9 492 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 LFNGQ8NES3 379 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 FCGR1BQ92637 280 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 B9D2Q9BPU9 175 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 CENPOQ9BU64 300 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 YTHDF1Q9BYJ9 559 aaKnown RBP18.21■□□□□ 0.51
LSM4-204ENST00000594828 TXNL4BQ9NX01 149 aaKnown RBP18.21■□□□□ 0.51
LSM4-204ENST00000594828 SDHAF2Q9NX18 166 aa18.21■□□□□ 0.51
LSM4-204ENST00000594828 ARL6IP1Q15041 203 aa18.2■□□□□ 0.5
LSM4-204ENST00000594828 SRSF7Q16629 238 aaKnown RBP eCLIP18.2■□□□□ 0.5
LSM4-204ENST00000594828 GINS4Q9BRT9 223 aa18.2■□□□□ 0.5
LSM4-204ENST00000594828 ALX4Q9H161 411 aaPredicted RBP18.2■□□□□ 0.5
LSM4-204ENST00000594828 RBM7Q9Y580 266 aaKnown RBP18.2■□□□□ 0.5
LSM4-204ENST00000594828 NOTOA8MTQ0 251 aa18.19■□□□□ 0.5
LSM4-204ENST00000594828 SLC25A17O43808 307 aa18.19■□□□□ 0.5
LSM4-204ENST00000594828 CD40LGP29965 261 aa18.19■□□□□ 0.5
LSM4-204ENST00000594828 STUB1Q9UNE7 303 aa18.19■□□□□ 0.5
LSM4-204ENST00000594828 LGALS7P47929 136 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 INSL3P51460 131 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 TAGLNQ01995 201 aaKnown RBP18.18■□□□□ 0.5
LSM4-204ENST00000594828 FXYD3Q14802 87 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 CDNFQ49AH0 187 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 C11orf87Q6NUJ2 197 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 Q6ZS49 121 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 TPRA1Q86W33 373 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 DCUN1D4Q92564 292 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 ARPC1AQ92747 370 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 MS4A10Q96PG2 267 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 PRR25Q96S07 402 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 TPSG1Q9NRR2 321 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 ELF5Q9UKW6 265 aaPredicted RBP18.18■□□□□ 0.5
LSM4-204ENST00000594828 SSR3Q9UNL2 185 aa18.18■□□□□ 0.5
LSM4-204ENST00000594828 IGKV1D-8A0A087WSZ0 117 aa18.17■□□□□ 0.5
LSM4-204ENST00000594828 LGALS1P09382 135 aaKnown RBP18.17■□□□□ 0.5
LSM4-204ENST00000594828 GRPEL2Q8TAA5 225 aa18.17■□□□□ 0.5
LSM4-204ENST00000594828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.17■□□□□ 0.5
LSM4-204ENST00000594828 LINC01619G3V211 115 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 OVOL1O14753 267 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 ARPC1BO15143 372 aaKnown RBP18.16■□□□□ 0.5
LSM4-204ENST00000594828 CNIH1O95406 144 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 IGLV2-23P01705 113 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 DTYMKP23919 212 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 TPPP2P59282 170 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 CBX3Q13185 183 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 H1FOOQ8IZA3 346 aaPredicted RBP18.16■□□□□ 0.5
LSM4-204ENST00000594828 BVESQ8NE79 360 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 C5orf30Q96GV9 206 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 HARBI1Q96MB7 349 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 SLA2Q9H6Q3 261 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 DAPK2Q9UIK4 370 aa18.16■□□□□ 0.5
LSM4-204ENST00000594828 LSM4Q9Y4Z0 139 aaKnown RBP18.16■□□□□ 0.5
LSM4-204ENST00000594828 SHOXO15266 292 aa18.15■□□□□ 0.5
LSM4-204ENST00000594828 IGHV3-11P01762 117 aa18.15■□□□□ 0.5
LSM4-204ENST00000594828 SLURP1P55000 103 aa18.15■□□□□ 0.5
LSM4-204ENST00000594828 RTL8BQ17RB0 113 aa18.15■□□□□ 0.5
LSM4-204ENST00000594828 ZNF429Q86V71 674 aa18.15■□□□□ 0.5
LSM4-204ENST00000594828 DLX4Q92988 240 aaPredicted RBP18.15■□□□□ 0.5
LSM4-204ENST00000594828 ST6GALNAC5Q9BVH7 336 aa18.15■□□□□ 0.5
LSM4-204ENST00000594828 ZNF256Q9Y2P7 627 aaPredicted RBP18.15■□□□□ 0.5
LSM4-204ENST00000594828 RRP15Q9Y3B9 282 aaKnown RBP18.15■□□□□ 0.5
LSM4-204ENST00000594828 IGHV4OR15-8A0A075B7B6 117 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 A0A087WW49 117 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 TRGV3P03979 118 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 CRYGBP07316 175 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 RRASP10301 218 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 PJVKQ0ZLH3 352 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 TMEM177Q53S58 311 aa18.14■□□□□ 0.49
LSM4-204ENST00000594828 HACD4Q5VWC8 232 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms