RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 SAA2-SAA4A0A096LPE2 208 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 IGHV4-61A0A0C4DH41 118 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 LINC00473A8K010 186 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 H0YIZ8 118 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 M0R1X1 148 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 SAA2P0DJI9 122 aaPredicted RBP12.4□□□□□ -0.42
VRK3-207ENST00000594092 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
VRK3-207ENST00000594092 DLX1P56177 255 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 DSCR9P59020 149 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 LINC00205P59089 165 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 NMSQ5H8A3 153 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 ACOT7LQ6ZUV0 252 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 LINC00311Q8N616 119 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 TCTEX1D1Q8N7M0 179 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 Q8N7P7 452 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 RNASE11Q8TAA1 199 aaKnown RBP12.4□□□□□ -0.42
VRK3-207ENST00000594092 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 TCTEX1D2Q8WW35 142 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 ZNF251Q9BRH9 671 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 MED13LQ71F56 2210 aa12.4□□□□□ -0.42
VRK3-207ENST00000594092 ANKRD17O75179 2603 aaKnown RBP12.4□□□□□ -0.43
VRK3-207ENST00000594092 J3QR06 171 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
VRK3-207ENST00000594092 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 ARF6P62330 175 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 LCN2P80188 198 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 PAX2Q02962 417 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 ZNF585BQ52M93 769 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 FOXRED2Q8IWF2 684 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 ABHD12Q8N2K0 398 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 OR4D5Q8NGN0 318 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 FAM212BQ9NTI7 297 aaPredicted RBP12.39□□□□□ -0.43
VRK3-207ENST00000594092 OR5AC2Q9NZP5 309 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
VRK3-207ENST00000594092 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 NBPF19A0A087WUL8 3843 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 CSMD2Q7Z408 3487 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 hCG_1809904A0A1W2PP81 198 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 A0A1W2PPE2 198 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 A0A1W2PR64 198 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 A0A1W2PRV1 198 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 RNF222A6NCQ9 220 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 M0R1W7 72 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
VRK3-207ENST00000594092 DEDDO75618 318 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 IGKV1-39P01597 117 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
VRK3-207ENST00000594092 IGKV1D-39P04432 117 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 FAM219AQ8IW50 185 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 KCNRGQ8N5I3 272 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 OR8H1Q8NGG4 311 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 OR9G1Q8NH87 305 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 HEXA-AS1Q9H8Q6 139 aa12.39□□□□□ -0.43
VRK3-207ENST00000594092 BEX4Q9NWD9 120 aaPredicted RBP12.39□□□□□ -0.43
VRK3-207ENST00000594092 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 LPAR6P43657 344 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 AKR1C2P52895 323 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
VRK3-207ENST00000594092 CLEC12BQ2HXU8 276 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 OR2B11Q5JQS5 317 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 NCR3LG1Q68D85 454 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 SPAG16Q8N0X2 631 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 OR1S1Q8NH92 325 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 LSM10Q969L4 123 aaKnown RBP12.38□□□□□ -0.43
VRK3-207ENST00000594092 ITGB1BP2Q9UKP3 347 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 APCP25054 2843 aa12.38□□□□□ -0.43
VRK3-207ENST00000594092 KANTRA0A1W2PQU2 76 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 K7EPK0 472 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 RAMP3O60896 148 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 FOXH1O75593 365 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 ATG12O94817 140 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 SLC25A6P12236 298 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 DEFB113Q30KQ7 82 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 KIR3DL3Q8N743 410 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 RRNAD1Q96FB5 475 aaKnown RBP12.37□□□□□ -0.43
VRK3-207ENST00000594092 S1PR3Q99500 378 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 CLEC7AQ9BXN2 247 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 U3KQ87 197 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 NAV2Q8IVL1 2488 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 IGHV2-70DA0A0C4DH43 119 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 A0A1B0GU03 582 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 FAM157AC9JC47 383 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 NKX2-1P43699 371 aaPredicted RBP12.37□□□□□ -0.43
VRK3-207ENST00000594092 C1orf122Q6ZSJ8 110 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 ZNF833PQ6ZTB9 187 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 CD300LFQ8TDQ1 290 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 GPR146Q96CH1 333 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 MMP26Q9NRE1 261 aa12.37□□□□□ -0.43
VRK3-207ENST00000594092 POLR3KQ9Y2Y1 108 aaPredicted RBP12.37□□□□□ -0.43
VRK3-207ENST00000594092 E5RGE8 158 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 IGLV1-47P01700 117 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 EPHA1P21709 976 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms