RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZNF729A6NN14 1252 aaPredicted RBP10.89□□□□□ -0.67
VRK3-205ENST00000593919 F2RL2O00254 374 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 FBXO24O75426 580 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 FAM157CP0CG43 387 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 LOXL3P58215 753 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 ZNF841Q6ZN19 808 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 CMTM1Q8IZ96 169 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
VRK3-205ENST00000593919 GPR137BO60478 399 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 IGHV4-39P01824 125 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 OR8U9P0C7N5 309 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 GPR6P46095 362 aaPredicted RBP10.88□□□□□ -0.67
VRK3-205ENST00000593919 MEF2CQ06413 473 aaPredicted RBP10.88□□□□□ -0.67
VRK3-205ENST00000593919 OR8U1Q8NH10 309 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 TMEM56Q96MV1 263 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 ZFP57Q9NU63 452 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 GNG12Q9UBI6 72 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 MIOXQ9UGB7 285 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 JPT1Q9UK76 154 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 RBM7Q9Y580 266 aaKnown RBP10.88□□□□□ -0.67
VRK3-205ENST00000593919 POMT1Q9Y6A1 747 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 TMEM56-RWDD3S4R434 201 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 APCP25054 2843 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 TRIM77I1YAP6 450 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 PGLYRP1O75594 196 aaPredicted RBP10.88□□□□□ -0.67
VRK3-205ENST00000593919 CDS2O95674 445 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 IGLV2-14P01704 120 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 APOC3P02656 99 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 CTRB1P17538 263 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 AKR1C2P52895 323 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 AKR1C1Q04828 323 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 TMEM200BQ69YZ2 307 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 CTRB2Q6GPI1 263 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 NRGNQ92686 78 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 OR8B2Q96RD0 313 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 LINC00574Q9H8X3 128 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 RAB9BQ9NP90 201 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
VRK3-205ENST00000593919 RAB19A4D1S5 217 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 MED6O75586 246 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 JTBO76095 146 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 WNT2P09544 360 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 CCL3L1P16619 93 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 UCP1P25874 307 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 S100GP29377 79 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 P2RY1P47900 373 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 MORN2Q502X0 79 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 UTF1Q5T230 341 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 EIF5AL1Q6IS14 154 aaKnown RBP10.87□□□□□ -0.67
VRK3-205ENST00000593919 DMBX1Q8NFW5 382 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 OR51H1Q8NH63 302 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 NEIL1Q96FI4 390 aaPredicted RBP10.87□□□□□ -0.67
VRK3-205ENST00000593919 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 SPIN2AQ99865 258 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 SPIN2BQ9BPZ2 258 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
VRK3-205ENST00000593919 H0Y980 276 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 MMP23AO75900 390 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 NXPH3O95157 252 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 IGHV3-7P01780 117 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 GAPDHP04406 335 aaKnown RBP10.86□□□□□ -0.67
VRK3-205ENST00000593919 NKX2-1P43699 371 aaPredicted RBP10.86□□□□□ -0.67
VRK3-205ENST00000593919 BTN1A1Q13410 526 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 PXDC1Q5TGL8 231 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 PRAMEF5Q5TYX0 476 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 OR2D2Q9H210 308 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 HRH4Q9H3N8 390 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 GAL3ST2Q9H3Q3 398 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 WFDC1Q9HC57 220 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 GFOD1Q9NXC2 390 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 FASNP49327 2511 aaKnown RBP10.86□□□□□ -0.67
VRK3-205ENST00000593919 TRBV23-1A0A0A0MS06 115 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 SSSCA1O60232 199 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 YPEL1O60688 119 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 F2RP25116 425 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 LPAR6P43657 344 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 ARHGDIBP52566 201 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 ERVFRD-1P60508 538 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 POLR2GP62487 172 aaKnown RBP eCLIP10.86□□□□□ -0.67
VRK3-205ENST00000593919 DEFA5Q01523 94 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 NHLH2Q02577 135 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 GPR157Q5UAW9 335 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 WDR25Q64LD2 544 aaPredicted RBP10.86□□□□□ -0.67
VRK3-205ENST00000593919 UQCC3Q6UW78 93 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 LEAP2Q969E1 77 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 YPEL2Q96QA6 119 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 AGMATQ9BSE5 352 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 PATZ1Q9HBE1 687 aaKnown RBP10.86□□□□□ -0.67
VRK3-205ENST00000593919 MMP26Q9NRE1 261 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 IDI2-AS1Q9NZ38 188 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 RNF150Q9ULK6 438 aa10.86□□□□□ -0.67
VRK3-205ENST00000593919 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 DUXBA0A1W2PPF3 345 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 ST8SIA5O15466 376 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 EPHA1P21709 976 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 NFYBP25208 207 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms