RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 IFI27L2Q9H2X8 130 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 NCOR1P1Q9H4R4 102 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 MED20Q9H944 212 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 SDF2L1Q9HCN8 221 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 SMPD3Q9NY59 655 aaPredicted RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 CD300AQ9UGN4 299 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 NUFIP1Q9UHK0 495 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 SMPXQ9UHP9 88 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 RABAC1Q9UI14 185 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 GTF2A1LQ9UNN4 478 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 WASHC3Q9Y3C0 194 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 IGHV3-66A0A0C4DH42 116 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 IGKV1-9A0A0C4DH69 117 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 IGHV7-4-1A0A0J9YVY3 117 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 TMEM30CPA0ZSE6 113 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SMIM9A6NGZ8 99 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 OR2T8A6NH00 312 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ACOD1A6NK06 481 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 EVPLLA8MZ36 301 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 PRR32B1ATL7 298 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 COPEO14579 308 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ORC5O43913 435 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SPAG7O75391 227 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 RBBP9O75884 186 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 DFFBO76075 338 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 KDM4BO94953 1096 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 APOL3O95236 402 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SPDEFO95238 335 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 IGKV3-20P01619 116 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 HBE1P02100 147 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 LYNP07948 512 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 CPEP16870 476 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SPI1P17947 270 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 GZMHP20718 246 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 HCCSP53701 268 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 KRTAP10-6P60371 365 aaPredicted RBP1.95□□□□□ -2.1
VRK3-204ENST00000593912 CAV1Q03135 178 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 PDZK1IP1Q13113 114 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 CRMP1Q14194 572 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ATP6AP1Q15904 470 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ODF4Q2M2E3 257 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 PIGYQ3MUY2 71 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 WDR73Q6P4I2 378 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 IDO2Q6ZQW0 420 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 PLEKHG7Q6ZR37 379 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 CEACAM19Q7Z692 300 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 CMTM1Q8IZ96 169 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 RNF113BQ8IZP6 322 aaKnown RBP1.95□□□□□ -2.1
VRK3-204ENST00000593912 TTC9CQ8N5M4 171 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SUMF2Q8NBJ7 301 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 HSD17B11Q8NBQ5 300 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 TMEM116Q8NCL8 245 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 OR4K15Q8NH41 348 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SCARB1Q8WTV0 552 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 IFT81Q8WYA0 676 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ACOT12Q8WYK0 555 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 SPDL1Q96EA4 605 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 TPD52L3Q96J77 140 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 CMTM3Q96MX0 182 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 C1QTNF4Q9BXJ3 329 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 TXLNGYQ9BZA5 131 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 MOB1AQ9H8S9 216 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 Q9HAA7 133 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ABCD2Q9UBJ2 740 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 ENOPH1Q9UHY7 261 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 TMEM5Q9Y2B1 443 aa1.95□□□□□ -2.1
VRK3-204ENST00000593912 A0A087WUV0 522 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 A0A096LPF7 62 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 TRBV4-1A0A0J9YWV2 114 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 SRRM4A7MD48 611 aaKnown RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZNF705GA8MUZ8 300 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZNF701M0R085 212 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 AIPO00170 330 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 NUPL2O15504 423 aaKnown RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 GMNNO75496 209 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 GATBO75879 557 aaKnown RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 APOHP02749 345 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 ISG15P05161 165 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 GSTT2P0CG29 244 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 GSTT2BP0CG30 244 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 RCC1P18754 421 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 M6PRP20645 277 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 PSMB6P28072 239 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 FGF9P31371 208 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 MC5RP33032 325 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 RBP2P50120 134 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 MTCP1P56278 107 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 DEFB1P60022 68 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 UBE2KP61086 200 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 PAFAH1B2P68402 229 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 MT1HP80294 61 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 PAX5Q02548 391 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 GK3PQ14409 553 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 KISS1Q15726 138 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZSCAN26Q16670 478 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 RRN3P1Q2M238 152 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 LRRC23Q53EV4 343 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 NXNL2Q5VZ03 156 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 DMKNQ6E0U4 476 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZNF662Q6ZS27 426 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms