RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 KCNJ3P48549 501 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 IL15RAQ13261 267 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 KRBOX4Q5JUW0 171 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 NCR3LG1Q68D85 454 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 C9orf139Q6ZV77 190 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 KCNG3Q8TAE7 436 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 ZNF418Q8TF45 676 aaPredicted RBP16.04■□□□□ 0.16
LSM4-203ENST00000593829 TMEM230Q96A57 120 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 ZNF714Q96N38 554 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 SPACA1Q9HBV2 294 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 CUBNO60494 3623 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 IGHV1-69DA0A0B4J2H0 117 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 MEX3AA1L020 520 aaKnown RBP16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A10PA6NDY2 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A18PA6NE21 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A16PA6NEW6 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A20PA6NIJ5 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A8PA6NJQ4 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A7PA6NKC0 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A22PA8MWA6 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A12PA8MX19 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A5PA8MXJ8 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A23PA8MXZ1 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 IGHV1-69P01742 117 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A15PP0C7V4 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A13PP0C7W8 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A14PP0C7W9 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 FAM90A24PP0C7X0 464 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 PET100P0DJ07 73 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 DLX6P56179 175 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 BRD3OSQ6XYD6 125 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 TCF23Q7RTU1 214 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 C11orf42Q8N5U0 333 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 TNFRSF14Q92956 283 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 COQ2Q96H96 371 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 Q96M66 194 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 SUCNR1Q9BXA5 334 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 SLC5A7Q9GZV3 580 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 ODAMA1E959 279 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 C17orf98A8MV24 154 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 ZNF705EA8MWA4 302 aaPredicted RBP16.03■□□□□ 0.16
LSM4-203ENST00000593829 TCF21O43680 179 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 MPIG6BO95866 241 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 CRYBA1P05813 215 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 GNB3P16520 340 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 DLX1P56177 255 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 PRB3Q04118 309 aaPredicted RBP16.03■□□□□ 0.16
LSM4-203ENST00000593829 BCL6BQ8N143 479 aaPredicted RBP16.03■□□□□ 0.16
LSM4-203ENST00000593829 OCSTAMPQ9BR26 566 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 LPAR5Q9H1C0 372 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 C5orf66Q9H5L9 145 aa16.03■□□□□ 0.16
LSM4-203ENST00000593829 UBE2J1Q9Y385 318 aaPredicted RBP16.03■□□□□ 0.16
LSM4-203ENST00000593829 TRGV10A0A0A0MS01 117 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 RNASEK-C17orf49H0YIS7 233 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 PMP2P02689 132 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 RBP4P02753 201 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 CD5P06127 495 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 RUSC1-AS1Q66K80 236 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 LHFPL1Q86WI0 220 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 RXFP4Q8TDU9 374 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 SFT2D1Q8WV19 159 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 C2orf50Q96LR7 162 aa16.02■□□□□ 0.16
LSM4-203ENST00000593829 SPP1P10451 314 aa16.02■□□□□ 0.15
LSM4-203ENST00000593829 ERVFRD-1P60508 538 aa16.02■□□□□ 0.15
LSM4-203ENST00000593829 PAX5Q02548 391 aa16.02■□□□□ 0.15
LSM4-203ENST00000593829 CORO2AQ92828 525 aa16.02■□□□□ 0.15
LSM4-203ENST00000593829 TMEM59Q9BXS4 323 aa16.02■□□□□ 0.15
LSM4-203ENST00000593829 NCOR1P1Q9H4R4 102 aa16.02■□□□□ 0.15
LSM4-203ENST00000593829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.02■□□□□ 0.15
LSM4-203ENST00000593829 MSGN1A6NI15 193 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 MFNGO00587 321 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 HIST1H1DP16402 221 aaKnown RBP16.01■□□□□ 0.15
LSM4-203ENST00000593829 SULT1A2P50226 295 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 UBE2E1P51965 193 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 KLRD1Q13241 179 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 KRTAP21-3Q3LHN1 58 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 RBMS3Q6XE24 437 aaKnown RBP16.01■□□□□ 0.15
LSM4-203ENST00000593829 PLPPR1Q8TBJ4 325 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 NEK7Q8TDX7 302 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 OR6C3Q9NZP0 311 aa16.01■□□□□ 0.15
LSM4-203ENST00000593829 COLCA2A8K830 154 aa16■□□□□ 0.15
LSM4-203ENST00000593829 FUT3P21217 361 aa16■□□□□ 0.15
LSM4-203ENST00000593829 RBM39Q14498 530 aaKnown RBP16■□□□□ 0.15
LSM4-203ENST00000593829 BRICD5Q6PL45 260 aa16■□□□□ 0.15
LSM4-203ENST00000593829 BTNL8Q6UX41 500 aa16■□□□□ 0.15
LSM4-203ENST00000593829 C15orf54Q8N8G6 183 aa16■□□□□ 0.15
LSM4-203ENST00000593829 GAL3ST2Q9H3Q3 398 aa16■□□□□ 0.15
LSM4-203ENST00000593829 PARP11Q9NR21 331 aa16■□□□□ 0.15
LSM4-203ENST00000593829 SMCO4Q9NRQ5 59 aa16■□□□□ 0.15
LSM4-203ENST00000593829 OR5AC2Q9NZP5 309 aa16■□□□□ 0.15
LSM4-203ENST00000593829 SOX21Q9Y651 276 aaPredicted RBP16■□□□□ 0.15
LSM4-203ENST00000593829 A0A0A6YYD4 124 aa16■□□□□ 0.15
LSM4-203ENST00000593829 KCNAB3O43448 404 aa16■□□□□ 0.15
LSM4-203ENST00000593829 FBXO24O75426 580 aa16■□□□□ 0.15
LSM4-203ENST00000593829 FCGR3AP08637 254 aa16■□□□□ 0.15
LSM4-203ENST00000593829 SUPT4H1P63272 117 aaKnown RBP16■□□□□ 0.15
LSM4-203ENST00000593829 PEA15Q15121 130 aa16■□□□□ 0.15
LSM4-203ENST00000593829 SURF2Q15527 256 aaPredicted RBP16■□□□□ 0.15
LSM4-203ENST00000593829 HMGN3Q15651 99 aa16■□□□□ 0.15
LSM4-203ENST00000593829 SIGLECL1Q8N7X8 197 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms