RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-219	ENST00000593101	SSX3	Q99909	188 aa		12.52	□□□□□ -0.41
PRKCSH-219	ENST00000593101	FLVCR2	Q9UPI3	526 aa		12.52	□□□□□ -0.41
PRKCSH-219	ENST00000593101	PRELID3B	Q9Y3B1	194 aa		12.52	□□□□□ -0.41
PRKCSH-219	ENST00000593101	NUBP2	Q9Y5Y2	271 aa		12.52	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TRAV6	A0A075B6T7	132 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	IGHV3-72	A0A0B4J1Y9	119 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	LINC00473	A8K010	186 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101		H7C2Y5	167 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ARPC1B	O15143	372 aa	Known RBP	12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	APOA2	P02652	100 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	H2AFB2	P0C5Z0	115 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CD1B	P29016	333 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RND3	P61587	244 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TAGLN	Q01995	201 aa	Known RBP	12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RGS21	Q2M5E4	152 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RBMS3	Q6XE24	437 aa	Known RBP	12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	KCTD9	Q7L273	389 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CENPS	Q8N2Z9	138 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	OR51H1	Q8NH63	302 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	C20orf85	Q9H1P6	137 aa		12.51	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CRLF1	O75462	422 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	PTTG1	O95997	202 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	FAM106CP	P0CH98	169 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RRAS	P10301	218 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CD24	P25063	80 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TAS2R31	P59538	309 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CBX3	Q13185	183 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	LRRC75B	Q2VPJ9	315 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	C11orf88	Q6PI97	169 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	PLET1	Q6UQ28	207 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101		Q6YL49	198 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SGPP2	Q8IWX5	399 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SIGLECL1	Q8N7X8	197 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	OR5AN1	Q8NGI8	311 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ZFAND2B	Q8WV99	257 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CFHR4	Q92496	578 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ZNF48	Q96MX3	618 aa	Predicted RBP	12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SLC35D1	Q9NTN3	355 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	NUDT15	Q9NV35	164 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	KCNIP3	Q9Y2W7	256 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	WASHC3	Q9Y3C0	194 aa		12.5	□□□□□ -0.41
PRKCSH-219	ENST00000593101	HIVEP2	P31629	2446 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	C3orf85	A0A1B0GTC6	90 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	VGLL3	A8MV65	326 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101		H0YJW9	148 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	FCGR3B	O75015	233 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	F2R	P25116	425 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	KIR2DS2	P43631	304 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	DYNLT3	P51808	116 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	HES1	Q14469	280 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	AANAT	Q16613	207 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RTL8B	Q17RB0	113 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TMEM128	Q5BJH2	165 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	OR2B11	Q5JQS5	317 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SLC25A42	Q86VD7	318 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	THNSL2	Q86YJ6	484 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SPAG16	Q8N0X2	631 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	DDB2	Q92466	427 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TMEM230	Q96A57	120 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	PRDM13	Q9H4Q3	707 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TLN2	Q9Y4G6	2542 aa		12.49	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ANK3	Q12955	4377 aa	Known RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	BTBD17	A6NE02	478 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CRYM-AS1	A6NIL9	109 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	FAM90A9P	A6NNJ1	464 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101		H3BUX3	64 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	IGKV1D-33	P01593	117 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	IGKV1-33	P01594	117 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SNRNP70	P08621	437 aa	Known RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	FAM157C	P0CG43	387 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SPN	P16150	400 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ANXA7	P20073	488 aa	Known RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	IER3	P46695	156 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	HABP2	Q14520	560 aa	Predicted RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	PDPN	Q86YL7	162 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	TCTEX1D1	Q8N7M0	179 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	OR2T10	Q8NGZ9	312 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	CD300LF	Q8TDQ1	290 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	FLYWCH2	Q96CP2	140 aa	Known RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	NAA60	Q9H7X0	242 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	BEX1	Q9HBH7	125 aa		12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	LIN7C	Q9NUP9	197 aa	Known RBP	12.48	□□□□□ -0.41
PRKCSH-219	ENST00000593101	F8	P00451	2351 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	INMT-MINDY4	F8WBC2	141 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	B3GALNT1	O75752	331 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	VENTX	O95231	258 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	MOS	P00540	346 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ANXA3	P12429	323 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RAB25	P57735	213 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	UBE2M	P61081	183 aa	Known RBP	12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	RPS16	P62249	146 aa	Known RBP	12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	DHODH	Q02127	395 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	HNF4G	Q14541	408 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	SP6	Q3SY56	376 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	C4orf46	Q504U0	113 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	PIFO	Q8TCI5	191 aa		12.47	□□□□□ -0.41
PRKCSH-219	ENST00000593101	ZNF418	Q8TF45	676 aa	Predicted RBP	12.47	□□□□□ -0.41

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