RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.81□□□□□ -0.68
APOC1-208ENST00000592535 SDHAF2Q9NX18 166 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 GAB2Q9UQC2 676 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 A3GALT2U3KPV4 340 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 A0A1W2PN81 502 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 SOX15O60248 233 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 DIRAS3O95661 229 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 APOA2P02652 100 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 CLEC2LP0C7M8 214 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
APOC1-208ENST00000592535 SDC2P34741 201 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 CHRNA7P36544 502 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 ALDH3B2P48448 385 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 RAB9AP51151 201 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 CRIP2P52943 208 aaPredicted RBP10.8□□□□□ -0.68
APOC1-208ENST00000592535 FHL3Q13643 280 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 NEDD8Q15843 81 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 CDNFQ49AH0 187 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 SFXN4Q6P4A7 337 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 Q6ZS49 121 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 OR11H1Q8NG94 326 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 LGALS14Q8TCE9 139 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 ABHD5Q8WTS1 349 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 UBE2E2Q96LR5 201 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 OR5B12Q96R08 314 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 TSNAXQ99598 290 aaKnown RBP10.8□□□□□ -0.68
APOC1-208ENST00000592535 GINS4Q9BRT9 223 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 FAM103A1Q9BTL3 118 aaKnown RBP10.8□□□□□ -0.68
APOC1-208ENST00000592535 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 SLC35D1Q9NTN3 355 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 SCOCQ9UIL1 159 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 NUBP2Q9Y5Y2 271 aa10.8□□□□□ -0.68
APOC1-208ENST00000592535 LOC100506127A0A0U1RQW1 187 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 I3L521 148 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 SPDEFO95238 335 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 CA2P00918 260 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 DTYMKP23919 212 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 LUMP51884 338 aaPredicted RBP10.79□□□□□ -0.68
APOC1-208ENST00000592535 MXD1Q05195 221 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 ARL6IP1Q15041 203 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 SRSF7Q16629 238 aaKnown RBP eCLIP10.79□□□□□ -0.68
APOC1-208ENST00000592535 H1FOOQ8IZA3 346 aaPredicted RBP10.79□□□□□ -0.68
APOC1-208ENST00000592535 OR5M8Q8NGP6 311 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 CASTOR1Q8WTX7 329 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 FLYWCH2Q96CP2 140 aaKnown RBP10.79□□□□□ -0.68
APOC1-208ENST00000592535 FOXA2Q9Y261 457 aaPredicted RBP10.79□□□□□ -0.68
APOC1-208ENST00000592535 VSIG4Q9Y279 399 aa10.79□□□□□ -0.68
APOC1-208ENST00000592535 RBM7Q9Y580 266 aaKnown RBP10.79□□□□□ -0.68
APOC1-208ENST00000592535 SLC25A17O43808 307 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 IGLV2-23P01705 113 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 CD36P16671 472 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 RPL5P46777 297 aaKnown RBP10.78□□□□□ -0.68
APOC1-208ENST00000592535 GNB1P62873 340 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 RUNX1Q01196 453 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 ASPHD1Q5U4P2 390 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 HACD4Q5VWC8 232 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 UNQ5815/PRO19632Q6UWF5 114 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 PPP1R27Q86WC6 154 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 TCTEX1D1Q8N7M0 179 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 BVESQ8NE79 360 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 OR1N2Q8NGR9 330 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 NUDCD2Q8WVJ2 157 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 CENPOQ9BU64 300 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 ST6GALNAC5Q9BVH7 336 aa10.78□□□□□ -0.68
APOC1-208ENST00000592535 TMEM235A6NFC5 223 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 ARPC1BO15143 372 aaKnown RBP10.77□□□□□ -0.69
APOC1-208ENST00000592535 SCGNO76038 276 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 TMEM267Q0VDI3 215 aaPredicted RBP10.77□□□□□ -0.69
APOC1-208ENST00000592535 ZNF260Q3ZCT1 412 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 LFNGQ8NES3 379 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 ARPC1AQ92747 370 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 ALX4Q9H161 411 aaPredicted RBP10.77□□□□□ -0.69
APOC1-208ENST00000592535 RHBDL2Q9NX52 303 aa10.77□□□□□ -0.69
APOC1-208ENST00000592535 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 J3QRK9 145 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 SSX5O60225 188 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 CRYGBP07316 175 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 GNG2P59768 71 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 SSBP2P81877 361 aaPredicted RBP10.76□□□□□ -0.69
APOC1-208ENST00000592535 DGCR2P98153 550 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 ZNF616Q08AN1 781 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 FXYD3Q14802 87 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 AKIRIN2Q53H80 203 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 TMEM177Q53S58 311 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 ACTBL2Q562R1 376 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 IDNKQ5T6J7 187 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 GRPEL2Q8TAA5 225 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 SLC25A38Q96DW6 304 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 HARBI1Q96MB7 349 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 DCSTAMPQ9H295 470 aa10.76□□□□□ -0.69
APOC1-208ENST00000592535 SRRM4A7MD48 611 aaKnown RBP10.75□□□□□ -0.69
APOC1-208ENST00000592535 LINC00473A8K010 186 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 SHOXO15266 292 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 OR8U8P0C7N1 319 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms