RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 EDDM3BP56851 147 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 SLC38A11Q08AI6 406 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 H2BFWTQ7Z2G1 175 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 LILRB2Q8N423 598 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 SCGB1C1Q8TD33 95 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 GAFA1Q96PS6 74 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 MGAQ8IWI9 3026 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 RBFOX3A6NFN3 312 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 DPRXA6NFQ7 191 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 CYB5R3P00387 301 aaPredicted RBP13.05□□□□□ -0.32
MBD1-227ENST00000592060 TNFSF4P23510 183 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 PTAFRP25105 342 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 TLE4Q04727 773 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 CD300LFQ8TDQ1 290 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 PLPPR2Q96GM1 343 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 WDR61Q9GZS3 305 aaKnown RBP13.05□□□□□ -0.32
MBD1-227ENST00000592060 CLN8Q9UBY8 286 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 BOD1L1Q8NFC6 3051 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 ZGRF1Q86YA3 2104 aa13.05□□□□□ -0.32
MBD1-227ENST00000592060 TRAV1-1A0A0B4J248 108 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 MARCH11A6NNE9 402 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 PMS2P5A8MQ11 134 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 ITGB1BP1O14713 200 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 ZNF134P52741 427 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 PRR30Q53SZ7 412 aaPredicted RBP13.04□□□□□ -0.32
MBD1-227ENST00000592060 UTF1Q5T230 341 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 ETV3LQ6ZN32 361 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 TCF23Q7RTU1 214 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 WFDC8Q8IUA0 241 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 BSNQ9UPA5 3926 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 DYSFO75923 2080 aa13.04□□□□□ -0.32
MBD1-227ENST00000592060 SLC31A2O15432 143 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 ZG16O60844 167 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 HBE1P02100 147 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 AARDQ4LEZ3 155 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 DTD1Q8TEA8 209 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 ZDHHC16Q969W1 377 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 SNRNP40Q96DI7 357 aaKnown RBP13.03□□□□□ -0.32
MBD1-227ENST00000592060 M0R1X1 148 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 OR9G9P0C7N8 305 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 ICAM4Q14773 271 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 ADIPOQQ15848 244 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 RPL39P5Q59GN2 51 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 ZNF506Q5JVG8 444 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 TEX36Q5VZQ5 186 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 ZNF788Q6ZQV5 615 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 TGIF2LYQ8IUE0 185 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 SFT2D1Q8WV19 159 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 RBMXL1Q96E39 390 aaKnown RBP13.03□□□□□ -0.32
MBD1-227ENST00000592060 VSIRQ9H7M9 311 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 GFOD1Q9NXC2 390 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 SH3BGRL2Q9UJC5 107 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 GAB2Q9UQC2 676 aa13.03□□□□□ -0.32
MBD1-227ENST00000592060 HCFC1P51610 2035 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 UBE2L5PA0A1B0GUS4 154 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 FAM90A9PA6NNJ1 464 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 RBFOX2O43251 390 aaKnown RBP eCLIP13.02□□□□□ -0.32
MBD1-227ENST00000592060 FCGR3BO75015 233 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 HPRT1P00492 218 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 CD55P08174 381 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 OR13C7P0DN81 318 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 SERF2P84101 59 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 ZNF726P1Q15940 193 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 OR8G2PQ6IF36 304 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 TAF15Q92804 592 aaKnown RBP eCLIP13.02□□□□□ -0.32
MBD1-227ENST00000592060 AIFM2Q9BRQ8 373 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 FAM234AQ9H0X4 552 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 ZNF665Q9H7R5 613 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 RAB9BQ9NP90 201 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 DCAF16Q9NXF7 216 aa13.02□□□□□ -0.32
MBD1-227ENST00000592060 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.33
MBD1-227ENST00000592060 ANKRD11Q6UB99 2663 aaPredicted RBP13.02□□□□□ -0.33
MBD1-227ENST00000592060 KBTBD11-OT1A0A1B0GTJ5 212 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 SCAF4O95104 1147 aaKnown RBP13.01□□□□□ -0.33
MBD1-227ENST00000592060 SRP19P09132 144 aaKnown RBP13.01□□□□□ -0.33
MBD1-227ENST00000592060 PAX6P26367 422 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 BSPH1Q075Z2 132 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 HAGHQ16775 308 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 FAM122CQ6P4D5 195 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 C1orf229Q6ZS94 237 aaPredicted RBP13.01□□□□□ -0.33
MBD1-227ENST00000592060 MBD3L1Q8WWY6 194 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 DDB2Q92466 427 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 CIB3Q96Q77 187 aaPredicted RBP13.01□□□□□ -0.33
MBD1-227ENST00000592060 QTRT1Q9BXR0 403 aaKnown RBP13.01□□□□□ -0.33
MBD1-227ENST00000592060 SMCO4Q9NRQ5 59 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 TIMM9Q9Y5J7 89 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 APC2O95996 2303 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 PLCE1Q9P212 2302 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
MBD1-227ENST00000592060 IGHV3-7P01780 117 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 GYPAP02724 150 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 RAB7AP51149 207 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 ATP6V1FQ16864 119 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 SSX7Q7RTT5 188 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 CENPVQ7Z7K6 275 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms