RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 CDK1P06493 297 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 CPEP16870 476 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 ZP3P21754 424 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 CD40LGP29965 261 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 RPS16P62249 146 aaKnown RBP8.94□□□□□ -0.98
CLIP3-204ENST00000590559 PJVKQ0ZLH3 352 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 IRF3Q14653 427 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 HAGHQ16775 308 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 HSD17B12Q53GQ0 312 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 ZNF343Q6P1L6 599 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 LINC00322Q6ZN03 302 aaPredicted RBP8.94□□□□□ -0.98
CLIP3-204ENST00000590559 TMEM91Q6ZNR0 172 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 ANKRD13BQ86YJ7 626 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.94□□□□□ -0.98
CLIP3-204ENST00000590559 BPIFB6Q8NFQ5 453 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 OR9G4Q8NGQ1 327 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 SETD6Q8TBK2 473 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 ABHD5Q8WTS1 349 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 C5orf30Q96GV9 206 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 TMEM68Q96MH6 324 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 TMED9Q9BVK6 235 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 MND1Q9BWT6 205 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 A0A0G2JLM5 398 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 CASQ2O14958 399 aaPredicted RBP8.93□□□□□ -0.98
CLIP3-204ENST00000590559 CSN3P07498 182 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 PLAC9Q5JTB6 97 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 OGFRL1Q5TC84 451 aaPredicted RBP8.93□□□□□ -0.98
CLIP3-204ENST00000590559 ZFAND6Q6FIF0 208 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 CEACAM19Q7Z692 300 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 SGPP2Q8IWX5 399 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 OR5T1Q8NG75 326 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 ISOC1Q96CN7 298 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 ARHGAP5-AS1Q96IT6 56 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 URM1Q9BTM9 101 aaKnown RBP8.93□□□□□ -0.98
CLIP3-204ENST00000590559 PECRQ9BY49 303 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 TINAGL1Q9GZM7 467 aaPredicted RBP8.93□□□□□ -0.98
CLIP3-204ENST00000590559 PALMDQ9NP74 551 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 C12orf4Q9NQ89 552 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 RDH8Q9NYR8 311 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 ADAM30Q9UKF2 790 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 KCNK7Q9Y2U2 307 aa8.93□□□□□ -0.98
CLIP3-204ENST00000590559 KMT2AQ03164 3969 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 C13orf42A0A1B0GVH6 325 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 SRRM4A7MD48 611 aaKnown RBP8.92□□□□□ -0.98
CLIP3-204ENST00000590559 TRDCB7Z8K6 153 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 TRBV12-3P01733 135 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 ARSBP15848 533 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 LGALS7P47929 136 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 DYRK1AQ13627 763 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 SPHARQ15513 63 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 GRPEL2Q8TAA5 225 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 SPATA25Q9BR10 227 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 CABLES2Q9BTV7 478 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 SDHAF2Q9NX18 166 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 ZNF221Q9UK13 617 aa8.92□□□□□ -0.98
CLIP3-204ENST00000590559 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 IZUMO1RA6ND01 250 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 H0Y980 276 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 DIRAS3O95661 229 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 APOA2P02652 100 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 AADACP22760 399 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 SYNJ2BPP57105 145 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 TPBGQ13641 420 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 P2RY14Q15391 338 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 LIPKQ5VXJ0 399 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 ADAMTSL5Q6ZMM2 481 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 OR4A4PQ8NGN8 299 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 DDB2Q92466 427 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 USMG5Q96IX5 58 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 CMSS1Q9BQ75 279 aaKnown RBP8.91□□□□□ -0.98
CLIP3-204ENST00000590559 RSRP1Q9BUV0 290 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 SLC35D1Q9NTN3 355 aa8.91□□□□□ -0.98
CLIP3-204ENST00000590559 PEF1Q9UBV8 284 aaKnown RBP8.91□□□□□ -0.98
CLIP3-204ENST00000590559 TRBV6-7A0A0A0MS04 114 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 M0R1X1 148 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 EBAG9O00559 213 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 SERPINB10P48595 397 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 DEFA5Q01523 94 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 TAGLNQ01995 201 aaKnown RBP8.9□□□□□ -0.98
CLIP3-204ENST00000590559 PLA2G7Q13093 441 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 RCN1Q15293 331 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 IGSF11Q5DX21 431 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 Q8N402 240 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 ADAD2Q8NCV1 583 aaKnown RBP8.9□□□□□ -0.98
CLIP3-204ENST00000590559 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 AK6Q9Y3D8 172 aaKnown RBP8.9□□□□□ -0.98
CLIP3-204ENST00000590559 DMRT1Q9Y5R6 373 aa8.9□□□□□ -0.98
CLIP3-204ENST00000590559 TRBV9A0A0B4J1U6 114 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 FABP7O15540 132 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 OR2A4O95047 310 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 CNIH1O95406 144 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 CD3GP09693 182 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 CLDN12P56749 244 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 MED22Q15528 200 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 C2orf76Q3KRA6 126 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 LCN12Q6JVE5 192 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 TEX45Q8NA69 505 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 BVESQ8NE79 360 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 OR56B1Q8NGI3 324 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms