RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TCF21O43680 179 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 VENTXO95231 258 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 FAM106CPP0CH98 169 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 BTCP35070 178 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 LINC00205P59089 165 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 RND3P61587 244 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 BAMBIQ13145 260 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 ASAH1Q13510 395 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 SLC9A3R2Q15599 337 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 CMTM1Q8IZ96 169 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 ZDHHC22Q8N966 263 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 DRAXINQ8NBI3 349 aaPredicted RBP9.67□□□□□ -0.86
APOC1-206ENST00000590334 ZFAND1Q8TCF1 268 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 SLC25A21Q9BQT8 299 aaPredicted RBP9.67□□□□□ -0.86
APOC1-206ENST00000590334 TBC1D24Q9ULP9 559 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 GPR132Q9UNW8 380 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 TCF19Q9Y242 345 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 LINC00854A0A1B0GVQ3 168 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 A6NDX4 124 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 PGLYRP1O75594 196 aaPredicted RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 SNRNP70P08621 437 aaKnown RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 RRASP10301 218 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 PGAM2P15259 253 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 RPL30P62888 115 aaKnown RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 FBLN7Q53RD9 439 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 CCBE1Q6UXH8 406 aaPredicted RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 GLDNQ6ZMI3 551 aaPredicted RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 KCTD9Q7L273 389 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 PDPNQ86YL7 162 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 Q8N6K4 173 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 CAPSLQ8WWF8 208 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
APOC1-206ENST00000590334 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 SLC2A9Q9NRM0 540 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 PITPNC1Q9UKF7 332 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 WASHC3Q9Y3C0 194 aa9.66□□□□□ -0.86
APOC1-206ENST00000590334 IGHV3-72A0A0B4J1Y9 119 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 BTBD17A6NE02 478 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 RNF212BA8MTL3 300 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 MOSP00540 346 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 IFNA2P01563 188 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 APOA2P02652 100 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 RNASE1P07998 156 aaKnown RBP9.65□□□□□ -0.86
APOC1-206ENST00000590334 CD24P25063 80 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 CCR6P51684 374 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 BRWD1-AS2P59051 145 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 RBMS2Q15434 407 aaKnown RBP9.65□□□□□ -0.86
APOC1-206ENST00000590334 C16orf82Q7Z2V1 217 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 TCTEX1D1Q8N7M0 179 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 OR2T10Q8NGZ9 312 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 RBM14Q96PK6 669 aaKnown RBP9.65□□□□□ -0.86
APOC1-206ENST00000590334 GPHA2Q96T91 129 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 RNF5Q99942 180 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 RTBDNQ9BSG5 229 aaPredicted RBP9.65□□□□□ -0.86
APOC1-206ENST00000590334 C5orf66Q9H5L9 145 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 PALMDQ9NP74 551 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 FAM212BQ9NTI7 297 aaPredicted RBP9.65□□□□□ -0.86
APOC1-206ENST00000590334 VSIG4Q9Y279 399 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 PRELID3BQ9Y3B1 194 aa9.65□□□□□ -0.86
APOC1-206ENST00000590334 MPPED1O15442 326 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
APOC1-206ENST00000590334 TNFSF12O43508 249 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 NDUFB6O95139 128 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 RLN1P04808 185 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 PI3P19957 117 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 F2RP25116 425 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 S100GP29377 79 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 SLC6A1P30531 599 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 PIGPP57054 158 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
APOC1-206ENST00000590334 UBA52P62987 128 aaKnown RBP9.64□□□□□ -0.87
APOC1-206ENST00000590334 CATR1Q13166 79 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 RTL8BQ17RB0 113 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 ABCA11PQ4W5N1 156 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
APOC1-206ENST00000590334 MZT2BQ6NZ67 158 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 TBC1D26Q86UD7 250 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 OR8H1Q8NGG4 311 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 OR4C13Q8NGP0 309 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 TCTEX1D2Q8WW35 142 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 CHIAQ9BZP6 476 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 SLC35D1Q9NTN3 355 aa9.64□□□□□ -0.87
APOC1-206ENST00000590334 C14orf166Q9Y224 244 aaKnown RBP9.64□□□□□ -0.87
APOC1-206ENST00000590334 H7C2Y5 167 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 OR2F2O95006 317 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 IGKV1-16P04430 117 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 TMEM11P17152 192 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 HES1Q14469 280 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 LY6EQ16553 131 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 C16orf87Q6PH81 154 aa9.63□□□□□ -0.87
APOC1-206ENST00000590334 CCDC71LQ8N9Z2 235 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms