RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 LOC102723971A0A1B0GUV8 181 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 MARCH11A6NNE9 402 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 CEBPZOSA8MTT3 80 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 RBFOX2O43251 390 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 CD40P25942 277 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 KIR2DS2P43631 304 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 RAB7AP51149 207 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 EDDM3BP56851 147 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 RAB5BP61020 215 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 TNFAIP6P98066 277 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 FAM27E3Q08E93 113 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 SAV1Q9H4B6 383 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 ELOVL5Q9NYP7 299 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 CLN8Q9UBY8 286 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 GAB2Q9UQC2 676 aa15.93■□□□□ 0.14
PRKCSH-209ENST00000589838 NCR3LG1Q68D85 454 aa15.92■□□□□ 0.14
PRKCSH-209ENST00000589838 ZNRF1Q8ND25 227 aa15.92■□□□□ 0.14
PRKCSH-209ENST00000589838 NUP37Q8NFH4 326 aa15.92■□□□□ 0.14
PRKCSH-209ENST00000589838 HIST1H2BAQ96A08 127 aa15.92■□□□□ 0.14
PRKCSH-209ENST00000589838 CALYQ9NYX4 217 aa15.92■□□□□ 0.14
PRKCSH-209ENST00000589838 CISD1Q9NZ45 108 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-209ENST00000589838 C1orf196B1AJZ1 125 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 IFNA1P01562 189 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 MBP02144 154 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 BMP5P22003 454 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 SSX8Q7RTT4 187 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 SDSLQ96GA7 329 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 USF3Q68DE3 2245 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 H3BQ15 152 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 M0R1X1 148 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 NDUFA2O43678 99 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 ZG16O60844 167 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 FCGR3BO75015 233 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 LOXL3P58215 753 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 ERVK-16P61578 105 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 RPP30P78346 268 aaKnown RBP15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 SPRNQ5BIV9 151 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 TMEM108Q6UXF1 575 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 ZNF429Q86V71 674 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 RCC1LQ96I51 464 aaKnown RBP15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 GNG13Q9P2W3 67 aa15.91■□□□□ 0.14
PRKCSH-209ENST00000589838 IGHV1-46P01743 117 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 CGB3P0DN86 165 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 CGB7P0DN87 165 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 PTAFRP25105 342 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 GNB2P62879 340 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 PMS2P11Q13670 270 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 AARDQ4LEZ3 155 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 Q8TCH9 128 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 NIPSNAP3BQ9BS92 247 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 FAM234AQ9H0X4 552 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 VSIRQ9H7M9 311 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 GCM1Q9NP62 436 aa15.9■□□□□ 0.14
PRKCSH-209ENST00000589838 TRGV10A0A0A0MS01 117 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 PMS2P5A8MQ11 134 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 C16orf97H3BN30 126 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 BCL2P10415 239 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 IRF2P14316 349 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 CEBPGP53567 150 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 LCN15Q6UWW0 184 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 CYB561D1Q8N8Q1 229 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 TVP23CQ96ET8 276 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 DIRC2Q96SL1 478 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 S1PR3Q99500 378 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 P2RX4Q99571 388 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 SLC39A9Q9NUM3 307 aa15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 DIDO1Q9BTC0 2240 aaKnown RBP15.89■□□□□ 0.13
PRKCSH-209ENST00000589838 A0A087WWC5 75 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 ZNF726P1Q15940 193 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 TMEM30BQ3MIR4 351 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 STUMQ69YW2 141 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 SLC35E3Q7Z769 313 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 DOLPP1Q86YN1 238 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 ZNF709Q8N972 641 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 OR52E5Q8NH55 327 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 OR4A16Q8NH70 328 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 ZNF665Q9H7R5 613 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 KLF2Q9Y5W3 355 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 KBTBD11-OT1A0A1B0GTJ5 212 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 MAP1LC3B2A6NCE7 125 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 PROP1O75360 226 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 DAOP14920 347 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 SPCS3P61009 180 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 VWC2Q2TAL6 325 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 PRAMEF5Q5TYX0 476 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 RBMS3Q6XE24 437 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 ZDHHC16Q969W1 377 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 ABHD17AQ96GS6 310 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 MAP1LC3BQ9GZQ8 125 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 IFI27L2Q9H2X8 130 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 GFOD1Q9NXC2 390 aa15.88■□□□□ 0.13
PRKCSH-209ENST00000589838 A0A1W2PPH5 198 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 C17orf112F2Z3M2 114 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 OR2C1O95371 312 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 IFNA17P01571 189 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 NQO2P16083 231 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 FGF7P21781 194 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 MAS1LP35410 378 aa15.87■□□□□ 0.13
PRKCSH-209ENST00000589838 TAGLN2P37802 199 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms