RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SUPT4H1P63272 117 aaKnown RBP17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 C4orf46Q504U0 113 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 RPL39P5Q59GN2 51 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 MINOS1Q5TGZ0 78 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 Q6YL49 198 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 GLDNQ6ZMI3 551 aaPredicted RBP17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 LHFPL4Q7Z7J7 247 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 BEND2Q8NDZ0 799 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 OR52B4Q8NGK2 314 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 ALG5Q9Y673 324 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 MINOS1-NBL1R4GNA1 71 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 hCG_2014768A0A024R1R8 64 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 CRYM-AS1A6NIL9 109 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 RAB29O14966 203 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 HOXA3O43365 443 aaPredicted RBP17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 PRAF2O60831 178 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 IL5P05113 134 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 HTR1DP28221 377 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 UBE2MP61081 183 aaKnown RBP17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 DHODHQ02127 395 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 DHRS2Q13268 280 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 EIF4EBP1Q13541 118 aaPredicted RBP17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 OR4P4Q8NGL7 312 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 OR10X1Q8NGY0 326 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 C17orf50Q8WW18 174 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 SSMEM1Q8WWF3 244 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 ESM1Q9NQ30 184 aa17.18■□□□□ 0.34
R3HDM4-204ENST00000589428 C7orf66A4D0T2 115 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 TRIM77I1YAP6 450 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 PGLYRP1O75594 196 aaPredicted RBP17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 SRSF2Q01130 221 aaKnown RBP17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 HLA-DRB5Q30154 266 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 TBC1D26Q86UD7 250 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 CCDC71LQ8N9Z2 235 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 DUX5Q96PT3 197 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 ZNF251Q9BRH9 671 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 PIPOXQ9P0Z9 390 aa17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 AMMECR1Q9Y4X0 333 aaPredicted RBP17.17■□□□□ 0.34
R3HDM4-204ENST00000589428 MPPED1O15442 326 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 HLA-AP01891 365 aaKnown RBP17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 VAMP1P23763 118 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 ZBTB34Q8NCN2 500 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 MALSU1Q96EH3 234 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 GHITMQ9H3K2 345 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 NAA60Q9H7X0 242 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 GAB2Q9UQC2 676 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 TEX13DA0A0J9YY54 714 aaPredicted RBP17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 BTBD17A6NE02 478 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 UBA52P62987 128 aaKnown RBP17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 LYG2Q86SG7 212 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 TMEM86BQ8N661 226 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 AJUBAQ96IF1 538 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 DPM3Q9P2X0 92 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 POMT1Q9Y6A1 747 aa17.16■□□□□ 0.34
R3HDM4-204ENST00000589428 C9orf170A2RU37 121 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 CLDN34H7C241 214 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 S100GP29377 79 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 CEACAM3P40198 252 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 ZNF137PP52743 207 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 CBX3Q13185 183 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 SLC9A3R2Q15599 337 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 SSX2Q16385 188 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 SGPP2Q8IWX5 399 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 OR51H1Q8NH63 302 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 ST6GALNAC6Q969X2 333 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 TNFRSF19Q9NS68 423 aa17.15■□□□□ 0.34
R3HDM4-204ENST00000589428 ATRQ13535 2644 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 LEUTXA8MZ59 168 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 M0R1X1 148 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 IGHV4-59P01825 116 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 LINC00205P59089 165 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 RPL30P62888 115 aaKnown RBP17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 LRRC75BQ2VPJ9 315 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 ZNF833PQ6ZTB9 187 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 MEGF9Q9H1U4 602 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 HILPDAQ9Y5L2 63 aa17.14■□□□□ 0.33
R3HDM4-204ENST00000589428 BUB1B-PAK6H3BSN5 160 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 SFT2D2O95562 160 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 F2RP25116 425 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 PAX6P26367 422 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 IER3P46695 156 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 DIAPH2-AS1Q14236 149 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 KRTAP21-3Q3LHN1 58 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 LDLRAD2Q5SZI1 272 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 DRAXINQ8NBI3 349 aaPredicted RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 ZNF431Q8TF32 576 aaPredicted RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 GALNT14Q96FL9 552 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 TP53RKQ96S44 253 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 S1PR3Q99500 378 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 GPN1Q9HCN4 374 aaPredicted RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 PRR13Q9NZ81 148 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 C3orf85A0A1B0GTC6 90 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 LINC00473A8K010 186 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 SNRPGP15A8MWD9 76 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 CREBL2O60519 120 aaPredicted RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 RNASE1P07998 156 aaKnown RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 OR5AC1P0C628 307 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 DUTP33316 252 aaKnown RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 ARHGDIBP52566 201 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms