RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 MED1Q15648 1581 aaPredicted RBP0.86□□□□□ -2.27
HMGN1P30-201ENST00000589286 THOC2Q8NI27 1593 aaKnown RBP0.86□□□□□ -2.27
HMGN1P30-201ENST00000589286 UNC80Q8N2C7 3258 aa0.86□□□□□ -2.27
HMGN1P30-201ENST00000589286 WDR87Q6ZQQ6 2873 aa0.86□□□□□ -2.27
HMGN1P30-201ENST00000589286 IGKV2-40A0A087WW87 121 aaPredicted RBP0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 OR5K4A6NMS3 321 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 UBE2L6O14933 153 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 CALUO43852 315 aaPredicted RBP0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 PLCH2O75038 1416 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 ASS1P00966 412 aaKnown RBP0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 IGKV2D-40P01614 121 aaPredicted RBP0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 IGHV1-69P01742 117 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 PVALBP20472 110 aaPredicted RBP0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 AGTR1P30556 359 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 CRATP43155 626 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 CTBP2P56545 445 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 GLO1Q04760 184 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 C4orf26Q17RF5 130 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 TBC1D28Q2M2D7 210 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 FREM1Q5H8C1 2179 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 SLC35E3Q7Z769 313 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 LRRC28Q86X40 367 aaPredicted RBP0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 BLIDQ8IZY5 108 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 NATD1Q8N6N6 113 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 ATP6V1C2Q8NEY4 427 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 SPACA4Q8TDM5 124 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 SMIM12Q96EX1 92 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 ACY3Q96HD9 319 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 C8orf4Q9NR00 106 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 EURLQ9NYK6 297 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 TP53TG1Q9Y2A0 90 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 CUL9Q8IWT3 2517 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 SCRIBQ14160 1630 aa0.85□□□□□ -2.27
HMGN1P30-201ENST00000589286 PIK3R4Q99570 1358 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 COL6A3P12111 3177 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 EYSQ5T1H1 3165 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 TMSB15BA0A087X1C1 80 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 FABP12A6NFH5 140 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 RFPL4AA6NLU0 287 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 A8MUN3 132 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 OR11H12B2RN74 326 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 FTCDNL1E5RQL4 147 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 RFPL4AL1F8VTS6 287 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 F8W036 122 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 IGLV3-27P01718 113 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 ZNF705DP0CH99 300 aaPredicted RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 ZNF705BP0CI00 300 aaPredicted RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 ZNF728P0DKX0 622 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 CCL3P10147 92 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 HSPA9P38646 679 aaKnown RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 XCL1P47992 114 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 SERPINB10P48595 397 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 IDH3GP51553 393 aaPredicted RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 LINC00313P59037 77 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 TMEM258P61165 79 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 DAD1P61803 113 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 SLC38A11Q08AI6 406 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 MGAT3Q09327 533 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 C1DQ13901 141 aaKnown RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 NUMA1Q14980 2115 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 MESTQ5EB52 335 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 SPATA31B1PQ5VZV4 182 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 PDPK2PQ6A1A2 396 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 AMTNQ6UX39 209 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 PLCZ1Q86YW0 608 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 RIBC1Q8N443 379 aaPredicted RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 OR11H2Q8NH07 326 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 NKX6-2Q9C056 277 aaPredicted RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 EIF5A2Q9GZV4 153 aaKnown RBP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 OR51B6Q9H340 312 aa0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.84□□□□□ -2.27
HMGN1P30-201ENST00000589286 KDM6BO15054 1643 aa0.84□□□□□ -2.28
HMGN1P30-201ENST00000589286 CHD1O14646 1710 aa0.84□□□□□ -2.28
HMGN1P30-201ENST00000589286 SZT2Q5T011 3432 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 SETBP1Q9Y6X0 1596 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 NPATQ14207 1427 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 KIF13AQ9H1H9 1805 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 DIDO1Q9BTC0 2240 aaKnown RBP0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 CENPFP49454 3210 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 TRGV5A0A0B4J1U4 118 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 GOLGA6L10A6NI86 522 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 CCRL2O00421 344 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 ITGB1BP1O14713 200 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 ARL6IP5O75915 188 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 OR13C7P0DN81 318 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 IL9P15248 144 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 HIST1H1CP16403 213 aaKnown RBP0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 F8A1P23610 371 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 CD24P25063 80 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 CRYBB3P26998 211 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 ADORA1P30542 326 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 GRPRP30550 384 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 DAPP51397 102 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 UBE2G2P60604 165 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 HLA-DRB5Q30154 266 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 TMEM31Q5JXX7 168 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 SDHAF4Q5VUM1 108 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 DRAM2Q6UX65 266 aa0.83□□□□□ -2.28
HMGN1P30-201ENST00000589286 SCGB1D4Q6XE38 83 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms