RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	OR1N2	Q8NGR9	330 aa		12.39	□□□□□ -0.43
TMEM259-206	ENST00000589055	CHCHD6	Q9BRQ6	235 aa		12.39	□□□□□ -0.43
TMEM259-206	ENST00000589055	TXNL4B	Q9NX01	149 aa	Known RBP	12.39	□□□□□ -0.43
TMEM259-206	ENST00000589055	FOXA2	Q9Y261	457 aa	Predicted RBP	12.39	□□□□□ -0.43
TMEM259-206	ENST00000589055	SLC25A17	O43808	307 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	RBBP9	O75884	186 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	RAB6A	P20340	208 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	GADD45A	P24522	165 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	CRIP2	P52943	208 aa	Predicted RBP	12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	ZNF260	Q3ZCT1	412 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	C9orf66	Q5T8R8	295 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	PPP1R27	Q86WC6	154 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	MS4A10	Q96PG2	267 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	TOLLIP	Q9H0E2	274 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	ATG5	Q9H1Y0	275 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	SLC35D1	Q9NTN3	355 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	SDHAF2	Q9NX18	166 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	SCOC	Q9UIL1	159 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	NUBP2	Q9Y5Y2	271 aa		12.38	□□□□□ -0.43
TMEM259-206	ENST00000589055	TRBV6-7	A0A0A0MS04	114 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	ARPC1B	O15143	372 aa	Known RBP	12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	IGHV3-11	P01762	117 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	APOA2	P02652	100 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	ECI1	P42126	302 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	SLURP1	P55000	103 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	SSBP2	P81877	361 aa	Predicted RBP	12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	ZNF616	Q08AN1	781 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	ARFRP1	Q13795	201 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	UNQ5815/PRO19632	Q6UWF5	114 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	LFNG	Q8NES3	379 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	OR10J5	Q8NHC4	309 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	GRPEL2	Q8TAA5	225 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	GHITM	Q9H3K2	345 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	RNF167	Q9H6Y7	350 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	STUB1	Q9UNE7	303 aa		12.37	□□□□□ -0.43
TMEM259-206	ENST00000589055	IGHV4OR15-8	A0A075B7B6	117 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055		A0A087WW49	117 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055		J3QRK9	145 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	IGLV2-23	P01705	113 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	CLEC2L	P0C7M8	214 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	OR8U8	P0C7N1	319 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	SERPINB10	P48595	397 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	RUNX1	Q01196	453 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	CD69	Q07108	199 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	PJVK	Q0ZLH3	352 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	PDPN	Q86YL7	162 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	DCUN1D4	Q92564	292 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	ARPC1A	Q92747	370 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	TSNAX	Q99598	290 aa	Known RBP	12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	RNF5	Q99942	180 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	OR51E2	Q9H255	320 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	DAPK2	Q9UIK4	370 aa		12.36	□□□□□ -0.43
TMEM259-206	ENST00000589055	METTL21EP	A6NDL7	271 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	NOTO	A8MTQ0	251 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	MRPS14	O60783	128 aa	Known RBP	12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	SPDEF	O95238	335 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	GAL	P22466	123 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	RANBP1	P43487	201 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	DEFA5	Q01523	94 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	FXYD3	Q14802	87 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	CDNF	Q49AH0	187 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	ACTBL2	Q562R1	376 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	BVES	Q8NE79	360 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	LGALS14	Q8TCE9	139 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	NUDCD2	Q8WVJ2	157 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	DLX4	Q92988	240 aa	Predicted RBP	12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	FLYWCH2	Q96CP2	140 aa	Known RBP	12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	GINS4	Q9BRT9	223 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	RYR2	Q92736	4967 aa		12.35	□□□□□ -0.43
TMEM259-206	ENST00000589055	TMEM235	A6NFC5	223 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	SRRM4	A7MD48	611 aa	Known RBP	12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	LGALS1	P09382	135 aa	Known RBP	12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	FGF9	P31371	208 aa	Predicted RBP	12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	TALDO1	P37837	337 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	TPPP2	P59282	170 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	SFXN4	Q6P4A7	337 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	ZNF562	Q6V9R5	426 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	HARBI1	Q96MB7	349 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	B9D2	Q9BPU9	175 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055		Q9H521	79 aa		12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	RRP15	Q9Y3B9	282 aa	Known RBP	12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	RBM7	Q9Y580	266 aa	Known RBP	12.34	□□□□□ -0.43
TMEM259-206	ENST00000589055	LINC00473	A8K010	186 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	LINC01619	G3V211	115 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	OVOL1	O14753	267 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	RAMP3	O60896	148 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	CRYGB	P07316	175 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	MXD1	Q05195	221 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	MRGPRG-AS1	Q2M3A8	158 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	AKIRIN2	Q53H80	203 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	ZNF773	Q6PK81	442 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	TCTEX1D1	Q8N7M0	179 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	OR5T1	Q8NG75	326 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	FCGR1B	Q92637	280 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	WWC2-AS2	Q96NR7	200 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	ST6GALNAC5	Q9BVH7	336 aa		12.33	□□□□□ -0.44
TMEM259-206	ENST00000589055	SSR3	Q9UNL2	185 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms