RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 J3QLI3 93 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 FCGR3BO75015 233 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
NPC1-207ENST00000588867 SERPINE2P07093 398 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 CEACAM3P40198 252 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 THBS3P49746 956 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 BCAP31P51572 246 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 ZNF137PP52743 207 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 FAM210AQ96ND0 272 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 MRPL20Q9BYC9 149 aaKnown RBP11.76□□□□□ -0.53
NPC1-207ENST00000588867 TMEM222Q9H0R3 208 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 PRELID3BQ9Y3B1 194 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 ABCA1O95477 2261 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 FLNBO75369 2602 aaKnown RBP11.75□□□□□ -0.53
NPC1-207ENST00000588867 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 SSX2Q16385 188 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 GPR157Q5UAW9 335 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 LIAT1Q6ZQX7 453 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 RBMXL1Q96E39 390 aaKnown RBP11.75□□□□□ -0.53
NPC1-207ENST00000588867 ADTRPQ96IZ2 230 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 CREBBPQ92793 2442 aa11.75□□□□□ -0.53
NPC1-207ENST00000588867 NPFFO15130 113 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 RAMP3O60896 148 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 IGHV4-38-2P0DP08 117 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 EPHA1P21709 976 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 PAX6P26367 422 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 LPAR6P43657 344 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 RRAS2P62070 204 aaPredicted RBP11.74□□□□□ -0.53
NPC1-207ENST00000588867 ZNF816Q0VGE8 651 aaPredicted RBP11.74□□□□□ -0.53
NPC1-207ENST00000588867 TPTE2P1Q5T6R2 138 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 RUSC1-AS1Q66K80 236 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 BRD3OSQ6XYD6 125 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 MOB3BQ86TA1 216 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 ZNF695Q8IW36 515 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 MYO9AB2RTY4 2548 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 IGHV1-69DA0A0B4J2H0 117 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 IGHV1-69P01742 117 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 UCP1P25874 307 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 SAA4P35542 130 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 FCN2Q15485 313 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 LGI3Q8N145 548 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 C17orf50Q8WW18 174 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
NPC1-207ENST00000588867 IGHV3-72A0A0B4J1Y9 119 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 IGHV1-3A0A0C4DH29 117 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 H7C2Y5 167 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 CDS2O95674 445 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 HOXB5P09067 269 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 MIDNQ504T8 468 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 DDB2Q92466 427 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 SLC35D1Q9NTN3 355 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 MGAT4CQ9UBM8 478 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
NPC1-207ENST00000588867 MINOS1-NBL1R4GNA1 71 aa11.73□□□□□ -0.53
NPC1-207ENST00000588867 A0A0B4J2A0 478 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 HMX3A6NHT5 357 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 GOSR2O14653 212 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 APOA2P02652 100 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 SRPXP78539 464 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 C2orf68Q2NKX9 166 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 LYZL2Q7Z4W2 148 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
NPC1-207ENST00000588867 TCTEX1D1Q8N7M0 179 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 CD300LFQ8TDQ1 290 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 TMEM56Q96MV1 263 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 SHPKQ9UHJ6 478 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 TMEM56-RWDD3S4R434 201 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 FLNAP21333 2647 aaKnown RBP11.72□□□□□ -0.53
NPC1-207ENST00000588867 FAM25EA8MYX2 175 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 CCSO14618 274 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 TXNL1O43396 289 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 ADAP1O75689 374 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 RPA2P15927 270 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 KIR2DS2P43631 304 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 RTL8BQ17RB0 113 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
NPC1-207ENST00000588867 DYNAPQ8N1N2 210 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 MALSU1Q96EH3 234 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
NPC1-207ENST00000588867 H0YJW9 148 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 S1PR2O95136 353 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 SIX6O95475 246 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 CRYZL1O95825 349 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 CXCL3P19876 107 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 OR5AN1Q8NGI8 311 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 OR4S2Q8NH73 311 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms