RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 ADTRPQ96IZ2 230 aa13.57□□□□□ -0.24
NFIX-210ENST00000588228 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
NFIX-210ENST00000588228 MAGT1Q9H0U3 335 aa13.57□□□□□ -0.24
NFIX-210ENST00000588228 IGSF10Q6WRI0 2623 aa13.57□□□□□ -0.24
NFIX-210ENST00000588228 FCGR3BO75015 233 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 HPRT1P00492 218 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 KRASP01116 189 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 TMEM33P57088 247 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 VAMP2P63027 116 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 C1orf229Q6ZS94 237 aaPredicted RBP13.56□□□□□ -0.24
NFIX-210ENST00000588228 OR2C3Q8N628 320 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 C8orf31Q8N9H6 132 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 DDB2Q92466 427 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
NFIX-210ENST00000588228 S1PR3Q99500 378 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 FAM90A26D6RGX4 464 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 CDKN1AP38936 164 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 ERVFRD-1P60508 538 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
NFIX-210ENST00000588228 LYRM2Q9NU23 88 aaPredicted RBP13.56□□□□□ -0.24
NFIX-210ENST00000588228 FBXL17Q9UF56 701 aa13.56□□□□□ -0.24
NFIX-210ENST00000588228 KLF2Q9Y5W3 355 aaPredicted RBP13.56□□□□□ -0.24
NFIX-210ENST00000588228 DSCAML1Q8TD84 2053 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 A0A087X0M5 115 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 A0A1B0GX30 115 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 A0A1W2PPH5 198 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 TOR1AO14656 332 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 CHST1O43916 411 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 C1QL1O75973 258 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 NXPH3O95157 252 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 F12P00748 615 aaPredicted RBP13.55□□□□□ -0.24
NFIX-210ENST00000588228 H2BFWTQ7Z2G1 175 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 LINC00311Q8N616 119 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 ZNF596Q8TC21 504 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 RAB40CQ96S21 281 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 SLC25A31Q9H0C2 315 aa13.55□□□□□ -0.24
NFIX-210ENST00000588228 LINC00862A6NCI5 91 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 MARCH11A6NNE9 402 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 GAPDHP04406 335 aaKnown RBP13.54□□□□□ -0.24
NFIX-210ENST00000588228 CAV2P51636 162 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 MIDNQ504T8 468 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 WDR25Q64LD2 544 aaPredicted RBP13.54□□□□□ -0.24
NFIX-210ENST00000588228 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 C8orf46Q8TAG6 207 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 R3HDM4Q96D70 268 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 CACNA1BQ00975 2339 aa13.54□□□□□ -0.24
NFIX-210ENST00000588228 FAM24AA6NFZ4 105 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 SYNGR2O43760 224 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 TMEM50AO95807 157 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 RNF224P0DH78 156 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 IGHV1-8P0DP01 117 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 EFNA4P52798 201 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
NFIX-210ENST00000588228 ZNF833PQ6ZTB9 187 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 SPOCK3Q9BQ16 436 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.53□□□□□ -0.24
NFIX-210ENST00000588228 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 CFAP46Q8IYW2 2715 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 IGSF23A1L1A6 192 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 FAM90A9PA6NNJ1 464 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 JTBO76095 146 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 RBP4P02753 201 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 ARHGDIBP52566 201 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 PAX9P55771 341 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 RPL23AP62750 156 aaKnown RBP13.53□□□□□ -0.24
NFIX-210ENST00000588228 TLE4Q04727 773 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 RPL7L1Q6DKI1 246 aaKnown RBP13.53□□□□□ -0.24
NFIX-210ENST00000588228 TMEM252Q8N6L7 170 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 ZNF383Q8NA42 475 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 SLC25A32Q9H2D1 315 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 PATZ1Q9HBE1 687 aaKnown RBP13.53□□□□□ -0.24
NFIX-210ENST00000588228 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
NFIX-210ENST00000588228 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 J3QR06 171 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 NMBP08949 121 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 NQO2P16083 231 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 GPR6P46095 362 aaPredicted RBP13.52□□□□□ -0.25
NFIX-210ENST00000588228 ERVK-16P61578 105 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 BAXQ07812 192 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 FAM71F2Q6NXP2 309 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 OR9G1Q8NH87 305 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.25
NFIX-210ENST00000588228 SMIM3Q9BZL3 60 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 ZNRD1Q9P1U0 126 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 HSPB7Q9UBY9 170 aa13.52□□□□□ -0.25
NFIX-210ENST00000588228 OVOL3O00110 214 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 MED6O75586 246 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 S100A1P23297 94 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 TAS2R30P59541 319 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 NHLH2Q02577 135 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 TNFRSF9Q07011 255 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 CLEC9AQ6UXN8 241 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 ZNF295-AS1Q8N0V1 137 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 UBAC2Q8NBM4 344 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 LY6G5BQ8NDX9 201 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 OR10X1Q8NGY0 326 aa13.51□□□□□ -0.25
NFIX-210ENST00000588228 BSCL2Q96G97 398 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms