RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.22□□□□□ -0.45
CCDC43-203ENST00000588210 OR2B8PP59922 312 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 Q6P435 159 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 SLC16A13Q7RTY0 426 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 CYB561D1Q8N8Q1 229 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 NRGNQ92686 78 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 NEUROG1Q92886 237 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 IFNA5P01569 189 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 IGLV2-14P01704 120 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 UBE2KP61086 200 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 TCTEX1D2Q8WW35 142 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 NINJ1Q92982 152 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 TVP23CQ96ET8 276 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 OR1A1Q9P1Q5 309 aa12.22□□□□□ -0.45
CCDC43-203ENST00000588210 CSMD2Q7Z408 3487 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.45
CCDC43-203ENST00000588210 HRNRQ86YZ3 2850 aaPredicted RBP12.21□□□□□ -0.45
CCDC43-203ENST00000588210 E7EQL1 145 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 H0YL77 283 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 H3BP45 60 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 IGKV1-39P01597 117 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 IGKV1D-39P04432 117 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 NQO2P16083 231 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
CCDC43-203ENST00000588210 TMEM267Q0VDI3 215 aaPredicted RBP12.21□□□□□ -0.45
CCDC43-203ENST00000588210 TBC1D28Q2M2D7 210 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 SLC35E3Q7Z769 313 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
CCDC43-203ENST00000588210 RNASE11Q8TAA1 199 aaKnown RBP12.21□□□□□ -0.45
CCDC43-203ENST00000588210 ITPR2Q14571 2701 aa12.21□□□□□ -0.46
CCDC43-203ENST00000588210 ABCA12Q86UK0 2595 aa12.21□□□□□ -0.46
CCDC43-203ENST00000588210 CXorf65A6NEN9 183 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 RHBDL1O75783 438 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 DLK1P80370 383 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 TESK1Q15569 626 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 Q6ZRM9 215 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 NIPSNAP3BQ9BS92 247 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
CCDC43-203ENST00000588210 SIRT7Q9NRC8 400 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 SYNGR2O43760 224 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 CLN5O75503 358 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 CA6P23280 308 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 CD200P41217 278 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 OR2T2Q6IF00 324 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 IL1F10Q8WWZ1 152 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 RTL8AQ9BWD3 113 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 CDH20Q9HBT6 801 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 LIN7CQ9NUP9 197 aaKnown RBP12.2□□□□□ -0.46
CCDC43-203ENST00000588210 RNF150Q9ULK6 438 aa12.2□□□□□ -0.46
CCDC43-203ENST00000588210 J3QW42 95 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 IGKV1-5P01602 117 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
CCDC43-203ENST00000588210 CEBPGP53567 150 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 ELOBQ15370 118 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF497Q6ZNH5 498 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 Q8IYB0 196 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF525Q8N782 197 aa12.19□□□□□ -0.46
CCDC43-203ENST00000588210 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 PPIHO43447 177 aaKnown RBP12.18□□□□□ -0.46
CCDC43-203ENST00000588210 FABP1P07148 127 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 FBP1P09467 338 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 FABP6P51161 128 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 NKX6-1P78426 367 aaPredicted RBP12.18□□□□□ -0.46
CCDC43-203ENST00000588210 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 CCL19Q99731 98 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
CCDC43-203ENST00000588210 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 ROS1P08922 2347 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 TACC2O95359 2948 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF727A8MUV8 499 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 B4DEV8 164 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
CCDC43-203ENST00000588210 ERVK11-1P61568 191 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 MUC15Q8N387 334 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 Q8WTZ3 238 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 MBD3L1Q8WWY6 194 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 TMPRSS5Q9H3S3 457 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 GSN-AS1Q9NRJ2 163 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 RPRMQ9NS64 109 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 PSENENQ9NZ42 101 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 POLDIP2Q9Y2S7 368 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 MMP24Q9Y5R2 645 aa12.18□□□□□ -0.46
CCDC43-203ENST00000588210 CHD3Q12873 2000 aaKnown RBP12.18□□□□□ -0.46
CCDC43-203ENST00000588210 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 OR2H2O95918 312 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 BCL2P10415 239 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 GLRXP35754 106 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 GLIPR1P48060 266 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 HBG1P69891 147 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 HBG2P69892 147 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 KIAA0141Q14154 515 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms