RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SLC25A38Q96DW6 304 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 CPNE2Q96FN4 548 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-220ENST00000585031 NABP2Q9BQ15 211 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 GHITMQ9H3K2 345 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 A0A1B0GVG6 124 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 CTDSPLO15194 276 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 HLA-DQB1P01920 261 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 ARSBP15848 533 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 BLVRBP30043 206 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-220ENST00000585031 ZNF134P52741 427 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 NDPQ00604 133 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 PAX5Q02548 391 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 ASAH1Q13510 395 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 MZT2BQ6NZ67 158 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 OR4C12Q96R67 309 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 DIABLOQ9NR28 239 aa13.83□□□□□ -0.2
TOP3A-220ENST00000585031 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 BPNT1O95861 308 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 LGALS1P09382 135 aaKnown RBP13.82□□□□□ -0.2
TOP3A-220ENST00000585031 ZNF93P35789 620 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-220ENST00000585031 C2orf76Q3KRA6 126 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 TMEM69Q5SWH9 247 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 PTX4Q96A99 478 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 THAP7Q9BT49 309 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-220ENST00000585031 HIPK2Q9H2X6 1198 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 GFOD1Q9NXC2 390 aa13.82□□□□□ -0.2
TOP3A-220ENST00000585031 MRPS7Q9Y2R9 242 aaKnown RBP13.82□□□□□ -0.2
TOP3A-220ENST00000585031 GSTZ1O43708 216 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-220ENST00000585031 SLC25A17O43808 307 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 SCGNO76038 276 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 IGHV3-11P01762 117 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 UBBP0CG47 229 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 TMEM225BP0DP42 221 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 RAB6AP20340 208 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 PIGYQ3MUY2 71 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 C8orf31Q8N9H6 132 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 ZNF439Q8NDP4 499 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 GPER1Q99527 375 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 TBC1D24Q9ULP9 559 aa13.81□□□□□ -0.2
TOP3A-220ENST00000585031 hCG_2014768A0A024R1R8 64 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 A0A0A6YYH2 397 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 TMEM272A0A1B0GTI8 110 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 A6NJ64 397 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 C12orf77C9JDV5 145 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 SDCBPO00560 298 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-220ENST00000585031 XRCC3O43542 346 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 MMDQ15546 238 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 ZNF57Q68EA5 555 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-220ENST00000585031 ELP2Q6IA86 826 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 SLC25A48Q6ZT89 311 aaKnown RBP13.8□□□□□ -0.2
TOP3A-220ENST00000585031 OR52M1Q8NGK5 317 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 ARL11Q969Q4 196 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 ABHD1Q96SE0 405 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 RAB22AQ9UL26 194 aa13.8□□□□□ -0.2
TOP3A-220ENST00000585031 METTL21EPA6NDL7 271 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 CENPXA8MT69 81 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 LY6G6CO95867 125 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 HLA-DRB1P01911 266 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 ZNF137PP52743 207 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 TAS2R20P59543 309 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 KISS1Q15726 138 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 CT45A1Q5HYN5 189 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 AWAT2Q6E213 333 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 RAB12Q6IQ22 244 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 LINC00322Q6ZN03 302 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-220ENST00000585031 SUMF2Q8NBJ7 301 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 OR10K1Q8NGX5 313 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 CT45A3Q8NHU0 189 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 CCDC107Q8WV48 283 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 SMIM4Q8WVI0 70 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 ATG5Q9H1Y0 275 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 GHRLQ9UBU3 117 aa13.79□□□□□ -0.2
TOP3A-220ENST00000585031 MRPS28Q9Y2Q9 187 aaKnown RBP13.79□□□□□ -0.2
TOP3A-220ENST00000585031 LINC00854A0A1B0GVQ3 168 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 GABARAPH6UMI1 98 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 HSPB1P04792 205 aaKnown RBP13.78□□□□□ -0.2
TOP3A-220ENST00000585031 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-220ENST00000585031 AP3S2P59780 193 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 FCAMRQ8WWV6 532 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 FAM46BQ96A09 425 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 C7orf50Q9BRJ6 194 aaKnown RBP13.78□□□□□ -0.2
TOP3A-220ENST00000585031 RSRP1Q9BUV0 290 aa13.78□□□□□ -0.2
TOP3A-220ENST00000585031 DPCDQ9BVM2 203 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-220ENST00000585031 A0A1W2PN81 502 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 BRI3O95415 125 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 GSTT2BP0CG30 244 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 GZMHP20718 246 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 CHRNA7P36544 502 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 ACTBP60709 375 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 IL13RA2Q14627 380 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 ECSCRQ19T08 205 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 TRIM63Q969Q1 353 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 S100A13Q99584 98 aa13.77□□□□□ -0.21
TOP3A-220ENST00000585031 IZUMO1RA6ND01 250 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 LYRM1O43325 122 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 PFDN1O60925 122 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms