RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SDHAF2	Q9NX18	166 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	FBXO7	Q9Y3I1	522 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760		A0A0A6YYH2	397 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760		A6NJ64	397 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	NUDT19	A8MXV4	375 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760		G3V318	75 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	AIRE	O43918	545 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	SPDEF	O95238	335 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	APOA2	P02652	100 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	PPIF	P30405	207 aa	Known RBP	10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	CRIP2	P52943	208 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	GNG2	P59768	71 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	C19orf54	Q5BKX5	351 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZNF695	Q8IW36	515 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	MRPL41	Q8IXM3	137 aa	Known RBP	10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	P2RX4	Q99571	388 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	SPATA2	Q9UM82	520 aa		10.4	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGLV1-40	P01703	118 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	PSG5	Q15238	335 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	CROCCP3	Q8IVE0	287 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	RCC1L	Q96I51	464 aa	Known RBP	10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	ST6GALNAC5	Q9BVH7	336 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	TPSG1	Q9NRR2	321 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	SLC35D1	Q9NTN3	355 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	WSB1	Q9Y6I7	421 aa		10.39	□□□□□ -0.75
SREBF1-223	ENST00000584760	TRAV41	A0A0B4J266	112 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	FCN1	O00602	326 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	SMIM18	P0DKX4	95 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	RPS19	P39019	145 aa	Known RBP	10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	MYCNOS	P40205	109 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	CDX1	P47902	265 aa	Predicted RBP	10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	LSM3	P62310	102 aa	Known RBP	10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	CX3CL1	P78423	397 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	PLGLA	Q15195	96 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	DEFB136	Q30KP8	78 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	CNIH2	Q6PI25	160 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	MINDY2	Q8NBR6	621 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	DDB2	Q92466	427 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	RAX2	Q96IS3	184 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	DUX3	Q96PT4	197 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	TSNAX	Q99598	290 aa	Known RBP	10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	KLK15	Q9H2R5	256 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	METTL1	Q9UBP6	276 aa	Known RBP	10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	ANXA10	Q9UJ72	324 aa		10.38	□□□□□ -0.75
SREBF1-223	ENST00000584760	TRAV18	A0A075B6X5	111 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	CCL24	O00175	119 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	SLC25A17	O43808	307 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	SOX15	O60248	233 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	DUS4L	O95620	317 aa	Known RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	IGLV2-23	P01705	113 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	CTXN2	P0C2S0	81 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	EGR2	P11161	476 aa	Predicted RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	NFYA	P23511	347 aa	Predicted RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	SSBP2	P81877	361 aa	Predicted RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	KIAA0141	Q14154	515 aa	Predicted RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	ECSCR	Q19T08	205 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	OR13F1	Q8NGS4	319 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	C4orf3	Q8WVX3	66 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	FLYWCH2	Q96CP2	140 aa	Known RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	WWC2-AS2	Q96NR7	200 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	FUNDC2	Q9BWH2	189 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	OR2W1	Q9Y3N9	320 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	RBM7	Q9Y580	266 aa	Known RBP	10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	TNC	P24821	2201 aa		10.37	□□□□□ -0.75
SREBF1-223	ENST00000584760	IGKV1D-13	A0A0B4J2D9	117 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	LINC00473	A8K010	186 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	TUSC2	O75896	110 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	CA2	P00918	260 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	IGLV2-14	P01704	120 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	HLA-DQB1	P01920	261 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	CRYGB	P07316	175 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	IGKV1-13	P0DP09	117 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	DUT	P33316	252 aa	Known RBP	10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	NCS1	P62166	190 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	RPS16	P62249	146 aa	Known RBP	10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	TAGLN	Q01995	201 aa	Known RBP	10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	CD69	Q07108	199 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	FHL3	Q13643	280 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	RTL8B	Q17RB0	113 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	TMEM177	Q53S58	311 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	UBE2NL	Q5JXB2	153 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	ZNF562	Q6V9R5	426 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	ZNF645	Q8N7E2	425 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	GVQW1	Q8N7I0	195 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	TCTEX1D1	Q8N7M0	179 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	SLC25A46	Q96AG3	418 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	ADTRP	Q96IZ2	230 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	UBE2E2	Q96LR5	201 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	HARBI1	Q96MB7	349 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	AUNIP	Q9H7T9	357 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	FOXA2	Q9Y261	457 aa	Predicted RBP	10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	NUBP2	Q9Y5Y2	271 aa		10.36	□□□□□ -0.75
SREBF1-223	ENST00000584760	TENM3	Q9P273	2699 aa		10.35	□□□□□ -0.75
SREBF1-223	ENST00000584760		A0A1W2PN81	502 aa		10.35	□□□□□ -0.75
SREBF1-223	ENST00000584760	XRCC3	O43542	346 aa		10.35	□□□□□ -0.75
SREBF1-223	ENST00000584760	PTHLH	P12272	177 aa		10.35	□□□□□ -0.75
SREBF1-223	ENST00000584760	CHRNA7	P36544	502 aa		10.35	□□□□□ -0.75
SREBF1-223	ENST00000584760	LUM	P51884	338 aa	Predicted RBP	10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms