RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CHRNA10Q9GZZ6 450 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 TUBA4BQ9H853 241 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 FOXJ2Q9P0K8 574 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 PILRAQ9UKJ1 303 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 PPIAL4EA0A075B759 164 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 PPIAL4DF5H284 164 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 OR4A5Q8NH83 315 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 LMX1BO60663 402 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 NPIPB7O75200 414 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 MOSPD3O75425 235 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 FXYD3Q14802 87 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 C19orf48Q6RUI8 117 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 IL11P20809 199 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 TNFRSF19Q9NS68 423 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 DLL3Q9NYJ7 618 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 A0A1W2PPE3 182 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 GRIFINA4D1Z8 144 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.611e-7■■■■■ 34.5
RNF43-208ENST00000584437 CRYBB3P26998 211 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 FHITP49789 147 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 HOXA5P20719 270 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 KCNMB1Q16558 191 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
RNF43-208ENST00000584437 KIAA0100Q14667 2235 aaKnown RBP11.22□□□□□ -0.61
RNF43-208ENST00000584437 PRSS53Q2L4Q9 553 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 C2orf83Q53S99 150 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 CYP2G1PQ6ZSU1 146 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 NUDT3O95989 172 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 SMIM13P0DJ93 91 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 SSTR5P35346 364 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 UCP2P55851 309 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 KCNMB2Q9Y691 235 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 DLEC1Q9Y238 1755 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 IGHV5-10-1A0A0J9YXX1 117 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 A1L4Q6 167 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 NPIPB13A6NJU9 1138 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 NPIPB4C9JG80 1138 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 ADAMTSL3P82987 1691 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 IGHV3-21A0A0B4J1V1 117 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 C17orf51A8MQB3 221 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 ZG16O60844 167 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 IGHMP01871 453 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 PSG9Q00887 426 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 HERPUD1Q15011 391 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 AUP1Q9Y679 476 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 TRPM6Q9BX84 2022 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 TRAV9-1A0A075B6T8 112 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 REG1BP48304 166 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 ZDHHC8Q9ULC8 765 aa11.22□□□□□ -0.61
RNF43-208ENST00000584437 APELAP0DMC3 54 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 RIPPLY2Q5TAB7 128 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 C1orf53Q5VUE5 145 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 WDYHV1Q96HA8 205 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 PAPPA2Q9BXP8 1791 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 LOC390937A0A1W2PQ73 354 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 CCL4P13236 92 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 GCHFRP30047 84 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 RND2P52198 227 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 HBBP68871 147 aa11.21□□□□□ -0.61
RNF43-208ENST00000584437 ZCCHC14Q8WYQ9 949 aaKnown RBP11.21□□□□□ -0.61
RNF43-208ENST00000584437 H7C2G1 150 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 STAG3L3P0CL85 134 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 COX5BP10606 129 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.62
RNF43-208ENST00000584437 OTX1P32242 354 aaPredicted RBP11.21□□□□□ -0.62
RNF43-208ENST00000584437 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.62
RNF43-208ENST00000584437 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.62
RNF43-208ENST00000584437 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 IL4P05112 153 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.62
RNF43-208ENST00000584437 RTP5Q14D33 572 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 RPRMQ9NS64 109 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 JPT1Q9UK76 154 aa11.21□□□□□ -0.62
RNF43-208ENST00000584437 MRPL13Q9BYD1 178 aaKnown RBP11.2□□□□□ -0.62
RNF43-208ENST00000584437 PRDM14Q9GZV8 571 aa11.2□□□□□ -0.62
RNF43-208ENST00000584437 GALNT14Q96FL9 552 aa11.2□□□□□ -0.62
RNF43-208ENST00000584437 TCF19Q9Y242 345 aa11.2□□□□□ -0.62
RNF43-208ENST00000584437 ARF6P62330 175 aa11.2□□□□□ -0.62
RNF43-208ENST00000584437 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
RNF43-208ENST00000584437 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms