RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 FLYWCH2Q96CP2 140 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 TSNAXQ99598 290 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 RNF5Q99942 180 aa10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ALX4Q9H161 411 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 SLC35D1Q9NTN3 355 aa10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ZMAT5Q9UDW3 170 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 DAPK2Q9UIK4 370 aa10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ELF5Q9UKW6 265 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 SSR3Q9UNL2 185 aa10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 COL7A1Q02388 2944 aa10.6□□□□□ -0.71
CDK5RAP3-233ENST00000584186 TRBV6-7A0A0A0MS04 114 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 NOTOA8MTQ0 251 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 I3L521 148 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 SLC25A17O43808 307 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 SOX15O60248 233 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 OR8U8P0C7N1 319 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 EGR2P11161 476 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 FGF9P31371 208 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ZNF616Q08AN1 781 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 FHL3Q13643 280 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ZNF260Q3ZCT1 412 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 CDNFQ49AH0 187 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ACTBL2Q562R1 376 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 C9orf66Q5T8R8 295 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ZNF773Q6PK81 442 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 UNQ5815/PRO19632Q6UWF5 114 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 LFNGQ8NES3 379 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 GRPEL2Q8TAA5 225 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 MS4A10Q96PG2 267 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 ST6GALNAC5Q9BVH7 336 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 YTHDF1Q9BYJ9 559 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 TPSG1Q9NRR2 321 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 SDHAF2Q9NX18 166 aa10.59□□□□□ -0.71
CDK5RAP3-233ENST00000584186 IGKV1D-8A0A087WSZ0 117 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 J3QRK9 145 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ECI1P42126 302 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 MXD1Q05195 221 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 CD69Q07108 199 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 C19orf54Q5BKX5 351 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ZNF562Q6V9R5 426 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ARPC1AQ92747 370 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 TOLLIPQ9H0E2 274 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 OR51E2Q9H255 320 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 RRP15Q9Y3B9 282 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 NUBP2Q9Y5Y2 271 aa10.58□□□□□ -0.72
CDK5RAP3-233ENST00000584186 LOC100506127A0A0U1RQW1 187 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 RAMP3O60896 148 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SPDEFO95238 335 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 CNIH1O95406 144 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 IGHV3-11P01762 117 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 CD40LGP29965 261 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SDC2P34741 201 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 CRIP2P52943 208 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 RUNX1Q01196 453 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 CBX3Q13185 183 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 FXYD3Q14802 87 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ARL6IP1Q15041 203 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 NEDD8Q15843 81 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ASPHD1Q5U4P2 390 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 PYHIN1Q6K0P9 492 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 TPRA1Q86W33 373 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 TCTEX1D1Q8N7M0 179 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 BVESQ8NE79 360 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 C5orf30Q96GV9 206 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 HARBI1Q96MB7 349 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 PRR25Q96S07 402 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SCOCQ9UIL1 159 aa10.57□□□□□ -0.72
CDK5RAP3-233ENST00000584186 TMEM235A6NFC5 223 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SHOXO15266 292 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 DIRAS3O95661 229 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 CLEC2LP0C7M8 214 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 DTYMKP23919 212 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 TPPP2P59282 170 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 PJVKQ0ZLH3 352 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 AKIRIN2Q53H80 203 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 HACD4Q5VWC8 232 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 H1FOOQ8IZA3 346 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 LGALS14Q8TCE9 139 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 NUDCD2Q8WVJ2 157 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 RNF167Q9H6Y7 350 aa10.56□□□□□ -0.72
CDK5RAP3-233ENST00000584186 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 A0A087WW49 117 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 LINC01619G3V211 115 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 ARPC1BO15143 372 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 LY86O95711 162 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 IGLV2-23P01705 113 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 TRGV3P03979 118 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 LGALS7P47929 136 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SLURP1P55000 103 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 GNG2P59768 71 aa10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 DCTN2Q13561 401 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-233ENST00000584186 SRSF7Q16629 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms