RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, human

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-208	ENST00000584052	CLCC1	Q96S66	551 aa		11.75	□□□□□ -0.53
RIOK3-208	ENST00000584052	ALX4	Q9H161	411 aa	Predicted RBP	11.75	□□□□□ -0.53
RIOK3-208	ENST00000584052	ATG5	Q9H1Y0	275 aa		11.75	□□□□□ -0.53
RIOK3-208	ENST00000584052	RHBDL2	Q9NX52	303 aa		11.75	□□□□□ -0.53
RIOK3-208	ENST00000584052	PIPOX	Q9P0Z9	390 aa		11.75	□□□□□ -0.53
RIOK3-208	ENST00000584052	SORL1	Q92673	2214 aa		11.75	□□□□□ -0.53
RIOK3-208	ENST00000584052	SAA2-SAA4	A0A096LPE2	208 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	RAB29	O14966	203 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	SAA2	P0DJI9	122 aa	Predicted RBP	11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	SPN	P16150	400 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	MC5R	P33032	325 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	TGFBR1	P36897	503 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	SLURP1	P55000	103 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	KIAA0141	Q14154	515 aa	Predicted RBP	11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	IDNK	Q5T6J7	187 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	ZNF833P	Q6ZTB9	187 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	ODF3L1	Q8IXM7	274 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	NPB	Q8NG41	125 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	CASTOR1	Q8WTX7	329 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	FLYWCH2	Q96CP2	140 aa	Known RBP	11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	MS4A10	Q96PG2	267 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	FBXL15	Q9H469	300 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	ZNF355P	Q9NSJ1	428 aa		11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	FOXA2	Q9Y261	457 aa	Predicted RBP	11.74	□□□□□ -0.53
RIOK3-208	ENST00000584052	ITGB1BP1	O14713	200 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	ST8SIA5	O15466	376 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	HSPA12A	O43301	675 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	FCGR3A	P08637	254 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	LYL1	P12980	280 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	GP9	P14770	177 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	GNB3	P16520	340 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	LSM3	P62310	102 aa	Known RBP	11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	CX3CL1	P78423	397 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	PITPNA	Q00169	270 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	ACTBL2	Q562R1	376 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	UNQ5815/PRO19632	Q6UWF5	114 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	FAM131A	Q6UXB0	335 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	PPP1R27	Q86WC6	154 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	TCTEX1D1	Q8N7M0	179 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	MINDY2	Q8NBR6	621 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	OR5H6	Q8NGV6	325 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	MYOZ3	Q8TDC0	251 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	SLC25A38	Q96DW6	304 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	ELOVL1	Q9BW60	279 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052	SPATA2	Q9UM82	520 aa		11.73	□□□□□ -0.53
RIOK3-208	ENST00000584052		A0A075B6Q4	140 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052		A0A0A6YYH2	397 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052		A6NJ64	397 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	RRH	O14718	337 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	GABARAP	O95166	117 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	DIRAS3	O95661	229 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	IGHV3-11	P01762	117 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	HSPB1	P04792	205 aa	Known RBP	11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	OR8U9	P0C7N5	309 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	FRMD6-AS1	P0C7T7	363 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	RPS19	P39019	145 aa	Known RBP	11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	ALDH3B2	P48448	385 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	NCS1	P62166	190 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	ASPHD1	Q5U4P2	390 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	PYHIN1	Q6K0P9	492 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052		Q6ZS49	121 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	ANKRD13B	Q86YJ7	626 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	OR4A4P	Q8NGN8	299 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	ARPC1A	Q92747	370 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	CABLES2	Q9BTV7	478 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	RSRP1	Q9BUV0	290 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	TOLLIP	Q9H0E2	274 aa		11.72	□□□□□ -0.53
RIOK3-208	ENST00000584052	OR5H14	A6NHG9	310 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	TRDC	B7Z8K6	153 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	TFAP2A	P05549	437 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	LGALS1	P09382	135 aa	Known RBP	11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	SCT	P09683	121 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	DTYMK	P23919	212 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	ZBTB25	P24278	435 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	CEACAM6	P40199	344 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	SERPINB10	P48595	397 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	TPPP2	P59282	170 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	ARFRP1	Q13795	201 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	RPL39P5	Q59GN2	51 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	CASC10	Q5T4H9	136 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	FAM71F2	Q6NXP2	309 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	EDARADD	Q8WWZ3	215 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	SLC25A46	Q96AG3	418 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	KCTD12	Q96CX2	325 aa	Known RBP	11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	ABHD14B	Q96IU4	210 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	IFI27L2	Q9H2X8	130 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	METTL1	Q9UBP6	276 aa	Known RBP	11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	SLC23A1	Q9UHI7	598 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	WASHC3	Q9Y3C0	194 aa		11.71	□□□□□ -0.53
RIOK3-208	ENST00000584052	IGHV4OR15-8	A0A075B7B6	117 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052		A0A087WW49	117 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	IGKV1-6	A0A0C4DH72	117 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	FCN1	O00602	326 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	FABP7	O15540	132 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	RBBP9	O75884	186 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	NDUFA3	O95167	84 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	CNIH1	O95406	144 aa		11.7	□□□□□ -0.54
RIOK3-208	ENST00000584052	CT45A6	P0DMU7	189 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms