RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	ALDH3A2	P51648	485 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	RPS16	P62249	146 aa	Known RBP	6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	FXYD3	Q14802	87 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	RPEL1	Q2QD12	228 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	RPL39P5	Q59GN2	51 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	ZNF343	Q6P1L6	599 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	TMPRSS11A	Q6ZMR5	421 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	CDH26	Q8IXH8	852 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	OR5T1	Q8NG75	326 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	OR13C5	Q8NGS8	318 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	DDB2	Q92466	427 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	SMIM19	Q96E16	107 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	NEDD4L	Q96PU5	975 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	TSNAX	Q99598	290 aa	Known RBP	6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	SLC2A8	Q9NY64	477 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	PEMT	Q9UBM1	199 aa		6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	RPL36	Q9Y3U8	105 aa	Known RBP	6.6	□□□□□ -1.35
NUP85-223	ENST00000583877	PKHD1	P08F94	4074 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	TRAV8-7	A0A075B6U6	113 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	TRBV5-5	A0A0J9YX44	114 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	ITGB1BP1	O14713	200 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	OGG1	O15527	345 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	CIB2	O75838	187 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	CAPG	P40121	348 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	CD300E	Q496F6	205 aa	Predicted RBP	6.59	□□□□□ -1.35
NUP85-223	ENST00000583877		Q499Y3	187 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	DEFB125	Q8N687	156 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	RHOXF1	Q8NHV9	184 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	FAM46B	Q96A09	425 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	ABHD14B	Q96IU4	210 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	USMG5	Q96IX5	58 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	CYYR1	Q96J86	154 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	TMEM68	Q96MH6	324 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	AGMAT	Q9BSE5	352 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	ST6GALNAC5	Q9BVH7	336 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	TINAGL1	Q9GZM7	467 aa	Predicted RBP	6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	SRD5A3	Q9H8P0	318 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877	FGF20	Q9NP95	211 aa	Predicted RBP	6.59	□□□□□ -1.35
NUP85-223	ENST00000583877		X6R8D5	127 aa		6.59	□□□□□ -1.35
NUP85-223	ENST00000583877		A0A0B4J203	849 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	ZNF785	A8K8V0	405 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	OR11H12	B2RN74	326 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	TRBV12-3	P01733	135 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	IGKV1-16	P04430	117 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	CD7	P09564	240 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	LGALS7	P47929	136 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	ETV1	P50549	477 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	RPS11	P62280	158 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	SSBP2	P81877	361 aa	Predicted RBP	6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	DEFA5	Q01523	94 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	DYRK1A	Q13627	763 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	YIF1B	Q5BJH7	314 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	OR2G6	Q5TZ20	316 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	PDPN	Q86YL7	162 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	DRAXIN	Q8NBI3	349 aa	Predicted RBP	6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	DYNLRB2	Q8TF09	96 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	SNAPC3	Q92966	411 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	PHB2	Q99623	299 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	SULT4A1	Q9BR01	284 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	BABAM2	Q9NXR7	383 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	COA4	Q9NYJ1	87 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	GHRL	Q9UBU3	117 aa		6.58	□□□□□ -1.36
NUP85-223	ENST00000583877	TRBV5-7	A0A0A0MS05	114 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	PNMA8C	A0A1B0GUJ8	204 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	CXorf65	A6NEN9	183 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	NUPR2	A6NF83	97 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877		H3BNX3	289 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	ZNF561-AS1	K7EIQ3	104 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	PROP1	O75360	226 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	NAPSA	O96009	420 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	APOA2	P02652	100 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	MYL12A	P19105	171 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	DCK	P27707	260 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	PMS2P11	Q13670	270 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	GUCA2B	Q16661	112 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	ZNF880	Q6PDB4	577 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	CBR4	Q8N4T8	237 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	ZFP41	Q8N8Y5	198 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	ZNF383	Q8NA42	475 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	PYDC1	Q8WXC3	89 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	OVOL2	Q9BRP0	275 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	UQCC2	Q9BRT2	126 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	FAAP24	Q9BTP7	215 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	PARP12	Q9H0J9	701 aa	Known RBP	6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	WFDC10A	Q9H1F0	79 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	NDUFA13	Q9P0J0	144 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	ZNF221	Q9UK13	617 aa		6.57	□□□□□ -1.36
NUP85-223	ENST00000583877	BMPR1B	O00238	502 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	MPPED1	O15442	326 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	LALBA	P00709	142 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	IGLV2-23	P01705	113 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	APELA	P0DMC3	54 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	ZBTB25	P24278	435 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	CEACAM6	P40199	344 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	PJVK	Q0ZLH3	352 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	MED21	Q13503	144 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	DEFB114	Q30KQ6	69 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	MOB1B	Q7L9L4	216 aa		6.56	□□□□□ -1.36
NUP85-223	ENST00000583877	C6orf201	Q7Z4U5	140 aa		6.56	□□□□□ -1.36

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