RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SPINT2O43291 252 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 SLC25A17O43808 307 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 LANCL1O43813 399 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 CA11O75493 328 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
TOP3A-215ENST00000583328 PLA2G7Q13093 441 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 C5orf64Q2M2E5 130 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 RAB9BQ9NP90 201 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 RHBDL2Q9NX52 303 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 KIAA1456Q9P272 454 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 HSF4Q9ULV5 492 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 SPATA2Q9UM82 520 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 FOXA2Q9Y261 457 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-215ENST00000583328 CEPT1Q9Y6K0 416 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 A3GALT2U3KPV4 340 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 H0Y980 276 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 H3BMQ9 156 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 SOCS1O15524 211 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 SOX15O60248 233 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 SCGNO76038 276 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 MT-ND4P03905 459 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 RORCP51449 518 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 TMEM267Q0VDI3 215 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-215ENST00000583328 SPCS2Q15005 226 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 C6orf201Q7Z4U5 140 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 PRR18Q8N4B5 295 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 TCTEX1D1Q8N7M0 179 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF439Q8NDP4 499 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 OR5H6Q8NGV6 325 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ABHD5Q8WTS1 349 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ACOT12Q8WYK0 555 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 MS4A10Q96PG2 267 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 SULT4A1Q9BR01 284 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 RBM38Q9H0Z9 239 aaKnown RBP9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ATG5Q9H1Y0 275 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 RETNQ9HD89 108 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 PLEKHJ1Q9NW61 149 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ETAA1Q9NY74 926 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 TRAPPC2LQ9UL33 140 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
TOP3A-215ENST00000583328 TNCP24821 2201 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
TOP3A-215ENST00000583328 UBE2QL1A1L167 161 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 CCDC160A6NGH7 325 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF701M0R085 212 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-215ENST00000583328 RAB27BO00194 218 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 TMEM50BP56557 158 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 NDPQ00604 133 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 TMEM30BQ3MIR4 351 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 STEAP3Q658P3 488 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF660Q6AZW8 331 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-215ENST00000583328 GTSCR1Q86UQ5 136 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 GAPTQ8N292 157 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 OR10R2Q8NGX6 335 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 AP3S1Q92572 193 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 SLC25A38Q96DW6 304 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 RAB3CQ96E17 227 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 ARHGAP5-AS1Q96IT6 56 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 RHOVQ96L33 236 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 MRPL20Q9BYC9 149 aaKnown RBP9.41□□□□□ -0.9
TOP3A-215ENST00000583328 FBXO7Q9Y3I1 522 aa9.41□□□□□ -0.9
TOP3A-215ENST00000583328 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 HBZP02008 142 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF182P17025 639 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-215ENST00000583328 CD40LGP29965 261 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 CRIP2P52943 208 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-215ENST00000583328 TPPP2P59282 170 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 CX3CL1P78423 397 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 ARL6IP1Q15041 203 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 MOGAT2Q3SYC2 334 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 PLAC9Q5JTB6 97 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 UBE2NLQ5JXB2 153 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 C6orf183Q5T699 404 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 PYHIN1Q6K0P9 492 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 NPBQ8NG41 125 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 DYNC2LI1Q8TCX1 351 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 NABP2Q9BQ15 211 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 FAM110AQ9BQ89 295 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 FAAP24Q9BTP7 215 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 PECRQ9BY49 303 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 HIPK2Q9H2X6 1198 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 CCDC59Q9P031 241 aaKnown RBP9.4□□□□□ -0.9
TOP3A-215ENST00000583328 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 RSL24D1Q9UHA3 163 aaKnown RBP9.4□□□□□ -0.9
TOP3A-215ENST00000583328 RNF150Q9ULK6 438 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 NUBP2Q9Y5Y2 271 aa9.4□□□□□ -0.9
TOP3A-215ENST00000583328 A0A0A6YYH2 397 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 A6NJ64 397 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 MFNGO00587 321 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 RGS11O94810 467 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 NDUFA3O95167 84 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 LY6G6CO95867 125 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 HIST1H1DP16402 221 aaKnown RBP9.39□□□□□ -0.91
TOP3A-215ENST00000583328 ZP3P21754 424 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 PLGLAQ15195 96 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 ACTBL2Q562R1 376 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 MZT2AQ6P582 158 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms