RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 ZNF479Q96JC4 524 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 CLCC1Q96S66 551 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 HSD17B10Q99714 261 aaKnown RBP3.78□□□□□ -1.8
PTPRM-215ENST00000583289 ATP5SQ99766 215 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 TCEAL7Q9BRU2 100 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 EGLN1Q9GZT9 426 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 C11orf1Q9H5F2 150 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 CCL28Q9NRJ3 127 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.78□□□□□ -1.8
PTPRM-215ENST00000583289 KIAA1456Q9P272 454 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 CLCF1Q9UBD9 225 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 FBXO7Q9Y3I1 522 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 TIMM9Q9Y5J7 89 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 ZDBF2Q9HCK1 2354 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 DNAJC13O75165 2243 aa3.78□□□□□ -1.8
PTPRM-215ENST00000583289 REV3LO60673 3130 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 AHCTF1Q8WYP5 2266 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ARHGAP21Q5T5U3 1957 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 A0A087WWC5 75 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 A0A1B0GWJ7 208 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 FAM24AA6NFZ4 105 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ATP6V1G2-DDX39BF2Z307 99 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SLC33A1O00400 549 aaPredicted RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ITGB1BP1O14713 200 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 HSD17B6O14756 317 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 TXNL1O43396 289 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SSSCA1O60232 199 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SMPD2O60906 423 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 WDR1O75083 606 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 CEACAM4O75871 244 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 OR2H2O95918 312 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 HAND1O96004 215 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 S100A6P06703 90 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 CCL2P13500 99 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 COX5AP20674 150 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 IGHV1-2P23083 117 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 KIR2DS2P43631 304 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 PPT1P50897 306 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 RAB13P51153 203 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 NOVA1P51513 510 aaKnown RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 CCL11P51671 97 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 AKR1C2P52895 323 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ATP5IP56385 69 aaPredicted RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 RPS23P62266 143 aaKnown RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 POLR2GP62487 172 aaKnown RBP eCLIP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 PNRC1Q12796 327 aaPredicted RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 PSG7Q13046 419 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 CLINT1Q14677 625 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 GUSBP1Q15486 140 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ANXA2RQ3ZCQ2 193 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 FAM74A3Q4VXF1 159 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SMUG1Q53HV7 270 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 CXorf66Q5JRM2 361 aaPredicted RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 PIK3CD-AS1Q5SR53 167 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ACSM6Q6P461 480 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 RTN4RL2Q86UN3 420 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ZNF645Q8N7E2 425 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 HSD17B11Q8NBQ5 300 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 NAXEQ8NCW5 288 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 OR5C1Q8NGR4 320 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 OR11L1Q8NGX0 322 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 OR51H1Q8NH63 302 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SLC25A40Q8TBP6 338 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 KLF14Q8TD94 323 aaPredicted RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 IL1F10Q8WWZ1 152 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ERGIC1Q969X5 290 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 MUCL1Q96DR8 90 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 BTF3L4Q96K17 158 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 TAAR6Q96RI8 345 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 P2RX4Q99571 388 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ZNF251Q9BRH9 671 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 ADAT1Q9BUB4 502 aaKnown RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 C1QTNF6Q9BXI9 259 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 HES7Q9BYE0 225 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SMIM3Q9BZL3 60 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 OR2J1Q9GZK6 312 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 HES4Q9HCC6 221 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 SIRT7Q9NRC8 400 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 TMEM242Q9NWH2 141 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 GAB2Q9UQC2 676 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 PRELID3BQ9Y3B1 194 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 RNF115Q9Y4L5 304 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 FREM1Q5H8C1 2179 aa3.77□□□□□ -1.81
PTPRM-215ENST00000583289 RANBP2P49792 3224 aaKnown RBP3.77□□□□□ -1.81
PTPRM-215ENST00000583289 WDR87Q6ZQQ6 2873 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 IGKV1-6A0A0C4DH72 117 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 A0A1W2PNU3 283 aaPredicted RBP3.76□□□□□ -1.81
PTPRM-215ENST00000583289 C7orf77A4D0Y5 90 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 OR5H1A6NKK0 313 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 C17orf112F2Z3M2 114 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 K7N7A8 449 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 CDIPTO14735 213 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 RAB29O14966 203 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 NUPL2O15504 423 aaKnown RBP3.76□□□□□ -1.81
PTPRM-215ENST00000583289 RBFOX2O43251 390 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTPRM-215ENST00000583289 TIMM8AO60220 97 aaPredicted RBP3.76□□□□□ -1.81
PTPRM-215ENST00000583289 MPDU1O75352 247 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 CLDN14O95500 239 aa3.76□□□□□ -1.81
PTPRM-215ENST00000583289 PTBP3O95758 552 aaKnown RBP3.76□□□□□ -1.81
PTPRM-215ENST00000583289 IFNA17P01571 189 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms