RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 XRCC3O43542 346 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 SAP30O75446 220 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 TPPPO94811 219 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 APOA1P02647 267 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 CD3GP09693 182 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 GP9P14770 177 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 SPNP16150 400 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 ZNF134P52741 427 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 PITPNAQ00169 270 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 LSAMPQ13449 338 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 MMDQ15546 238 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 HMGN3Q15651 99 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 CDNFQ49AH0 187 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 CT45A1Q5HYN5 189 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 OR4K15Q8NH41 348 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 CT45A3Q8NHU0 189 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 A0A075B6Q4 140 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 C12orf77C9JDV5 145 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 ATP6V0E1O15342 81 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 LANCL1O43813 399 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 HLA-DRB1P01911 266 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 GNB3P16520 340 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 DTYMKP23919 212 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 RAB9AP51151 201 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 MRPS15P82914 257 aaKnown RBP10.49□□□□□ -0.73
SS18-222ENST00000582792 HTD2P86397 168 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 HACD4Q5VWC8 232 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 ZFAND6Q6FIF0 208 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 Q6ZS49 121 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 DLX4Q92988 240 aaPredicted RBP10.49□□□□□ -0.73
SS18-222ENST00000582792 DGCR14Q96DF8 476 aaKnown RBP10.49□□□□□ -0.73
SS18-222ENST00000582792 OR51J1Q9H342 316 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 CHMP1AQ9HD42 196 aaPredicted RBP10.49□□□□□ -0.73
SS18-222ENST00000582792 Q9N2K0 584 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 COMMD3Q9UBI1 195 aa10.49□□□□□ -0.73
SS18-222ENST00000582792 IGHV7-81A0A0B4J1V7 117 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 CCDC160A6NGH7 325 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 DIRAS3O95661 229 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 HBZP02008 142 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 RCC1P18754 421 aaPredicted RBP10.48□□□□□ -0.73
SS18-222ENST00000582792 SLURP1P55000 103 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 STEAP3Q658P3 488 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 MINDY2Q8NBR6 621 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 OR10V1Q8NGI7 309 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 OR6Q1Q8NGQ2 317 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 TM2D3Q9BRN9 247 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 NXF2Q9GZY0 626 aaKnown RBP10.48□□□□□ -0.73
SS18-222ENST00000582792 ALX4Q9H161 411 aaPredicted RBP10.48□□□□□ -0.73
SS18-222ENST00000582792 GHITMQ9H3K2 345 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 TAF9BQ9HBM6 251 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 PARP11Q9NR21 331 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 GNG12Q9UBI6 72 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 A3GALT2U3KPV4 340 aa10.48□□□□□ -0.73
SS18-222ENST00000582792 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 LINC01619G3V211 115 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 FCGR3AP08637 254 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 TALDO1P37837 337 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 ACTBP60709 375 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 HLA-DRB3P79483 266 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 ARFRP1Q13795 201 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 ACSM6Q6P461 480 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 GALMQ96C23 342 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 CYYR1Q96J86 154 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 HDHD3Q9BSH5 251 aaPredicted RBP10.47□□□□□ -0.73
SS18-222ENST00000582792 SLIRPQ9GZT3 109 aaKnown RBP10.47□□□□□ -0.73
SS18-222ENST00000582792 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 EDA2RQ9HAV5 297 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 TPSG1Q9NRR2 321 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 RABL2AQ9UBK7 228 aaPredicted RBP10.47□□□□□ -0.73
SS18-222ENST00000582792 JPT1Q9UK76 154 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 ADAM30Q9UKF2 790 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 RABL2BQ9UNT1 228 aa10.47□□□□□ -0.73
SS18-222ENST00000582792 DPPA5A6NC42 116 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 TRDCB7Z8K6 153 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 EIF4EP06730 217 aaKnown RBP10.46□□□□□ -0.73
SS18-222ENST00000582792 CNTFRP26992 372 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 CBX5P45973 191 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 GNG2P59768 71 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 C5orf64Q2M2E5 130 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 PRR18Q8N4B5 295 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 OR4A4PQ8NGN8 299 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 OR1L1Q8NH94 360 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 ARPC1AQ92747 370 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 RITA1Q96K30 269 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 ZNF251Q9BRH9 671 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 TOLLIPQ9H0E2 274 aa10.46□□□□□ -0.73
SS18-222ENST00000582792 HYDINQ4G0P3 5121 aa10.46□□□□□ -0.74
SS18-222ENST00000582792 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 A0A087WW49 117 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 TMEM235A6NFC5 223 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 ITGB1BP1O14713 200 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 NBR2O15453 112 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 SOX15O60248 233 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 YPEL1O60688 119 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 HPGDSO60760 199 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 RGS11O94810 467 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 LGALS1P09382 135 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms